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E8YBM3

- E8YBM3_ECOKO

UniProt

E8YBM3 - E8YBM3_ECOKO

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Protein
Submitted name: 4-aminobutyrate aminotransferase
Gene
puuE, EKO11_2548, KO11_16300
Organism
Escherichia coli (strain ATCC 55124 / KO11)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. 4-aminobutyrate transaminase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. gamma-aminobutyric acid metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciECOL595495:GI1Q-2594-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
4-aminobutyrate aminotransferaseImported
Submitted name:
4-aminobutyrate transaminaseImported (EC:2.6.1.19Imported)
Gene namesi
Name:puuEImported
Ordered Locus Names:EKO11_2548Imported
ORF Names:KO11_16300Imported
OrganismiEscherichia coli (strain ATCC 55124 / KO11)Imported
Taxonomic identifieri595495 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
ProteomesiUP000010089: Chromosome, UP000002250: Chromosome

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

KOiK00823.
OMAiNIIPYES.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFiPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E8YBM3-1 [UniParc]FASTAAdd to Basket

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MSNNEFHQRR LSATPRGVGV MCNFFAQSAE NATLKDVEGN EYIDFAAGIA    50
VLNTGHRHPD LVAAVEQQLQ QFTHTAYQIV PYESYVTLAE KINALAPVSG 100
QAKTAFFTTG AEAVENAVKI ARAHTGRPGV IAFSGGFHGR TYMTMALTGK 150
VAPYKIGFGP FPGSVYHVPY PSDLHGISTQ DSLDAIERLF KSDIEAKQVA 200
AIIFEPVQGE GGFNVAPKEL VAAIRRLCDE HGIVMIADEV QSGFARTGKL 250
FAMDHYVDKP DLMTMAKSLA GGMPLSGVVG NANIMDAPAP GGLGGTYAGN 300
PLAVAAAHAV LNIIDKESLC ERANQLGQRL KNTLIDAKES VPAIAAVRGL 350
GSMIAAEFND PQTGEPSAAI AQKIQQRALA QGLLLLTCGA YGNVIRFLYP 400
LTIPDAQFDA AMKILQDALS D 421
Length:421
Mass (Da):44,729
Last modified:April 5, 2011 - v1
Checksum:i28E5663AC79D8E20
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002516 Genomic DNA. Translation: ADX51150.1.
CP002970 Genomic DNA. Translation: AFH18228.1.
RefSeqiYP_005278214.1. NC_016902.1.
YP_006165580.1. NC_017660.1.

Genome annotation databases

EnsemblBacteriaiADX51150; ADX51150; EKO11_2548.
AFH18228; AFH18228; KO11_16300.
GeneIDi11777333.
12758940.
KEGGiekf:KO11_16300.
eko:EKO11_2548.
PATRICi48645069. VBIEscCol13896_2572.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002516 Genomic DNA. Translation: ADX51150.1 .
CP002970 Genomic DNA. Translation: AFH18228.1 .
RefSeqi YP_005278214.1. NC_016902.1.
YP_006165580.1. NC_017660.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADX51150 ; ADX51150 ; EKO11_2548 .
AFH18228 ; AFH18228 ; KO11_16300 .
GeneIDi 11777333.
12758940.
KEGGi ekf:KO11_16300.
eko:EKO11_2548.
PATRICi 48645069. VBIEscCol13896_2572.

Phylogenomic databases

KOi K00823.
OMAi NIIPYES.

Enzyme and pathway databases

BioCyci ECOL595495:GI1Q-2594-MONOMER.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProi IPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view ]
PANTHERi PTHR11986. PTHR11986. 1 hit.
Pfami PF00202. Aminotran_3. 1 hit.
[Graphical view ]
PIRSFi PIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMi SSF53383. SSF53383. 1 hit.
TIGRFAMsi TIGR00700. GABAtrnsam. 1 hit.
PROSITEi PS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of chromosome of Escherichia coli KO11."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Munk A.C., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Keating D., Landick R., Woyke T.
    Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 55124 / KO11 and KO11Imported.
  2. "Optical mapping and sequencing of the Escherichia coli KO11 genome reveal extensive chromosomal rearrangements, and multiple tandem copies of the Zymomonas mobilis pdc and adhB genes."
    Turner P.C., Yomano L.P., Jarboe L.R., York S.W., Baggett C.L., Moritz B.E., Zentz E.B., Shanmugam K.T., Ingram L.O.
    J. Ind. Microbiol. Biotechnol. 39:629-639(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: KO11FLImported.

Entry informationi

Entry nameiE8YBM3_ECOKO
AccessioniPrimary (citable) accession number: E8YBM3
Entry historyi
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: May 14, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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