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E8YB68

- E8YB68_ECOKO

UniProt

E8YB68 - E8YB68_ECOKO

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Protein
Submitted name: Alpha amylase catalytic region
Gene
malS, EKO11_0155, KO11_04865
Organism
Escherichia coli (strain ATCC 55124 / KO11)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. alpha-amylase activity Source: InterPro
  2. calcium ion binding Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. alpha-glucan catabolic process Source: InterPro
  2. cellular oligosaccharide catabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciECOL595495:GI1Q-156-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha amylase catalytic regionImported
Submitted name:
Alpha-amylaseImported
Gene namesi
Name:malSImported
Ordered Locus Names:EKO11_0155Imported
ORF Names:KO11_04865Imported
OrganismiEscherichia coli (strain ATCC 55124 / KO11)Imported
Taxonomic identifieri595495 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
ProteomesiUP000010089: Chromosome, UP000002250: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. periplasmic space Source: InterPro
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1818 PredictedImported
Add
BLAST
Chaini19 – 676658 PredictedImported
PRO_5000704281Add
BLAST

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

KOiK01176.
OMAiGQNWHSF.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

E8YB68-1 [UniParc]FASTAAdd to Basket

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MKLAACFLTL LPGFAVAASW TSPGFPAFSE QGTGTFVSHA QLPKGTRPLT    50
LNFDQQCWQP ADAIKLNQML SLQPCSNTPP QWRLFRDGKY TLQIDTRSGT 100
PTLMISIQNA AEPVANLVRE CPKWDGLPLT LDVSATFPEG AAVRDYYSQQ 150
IAIVKNGQIT LQPAATSNGL LLLERAETDA PAPFDWHNAT VYFVLTDRFE 200
NGDPSNDQSY GRHKDGMAEI GTFHGGDLRG LTNKLDYLQQ LGVNALWISA 250
PFEQIHGWVG GGTKGDFPHY AYHGYYTQDW TNLDANMGNE ADLRTLVDSA 300
HQRGIRILFD VVMNHTGYAT LADMQEYQFG ALYLSGDEVK KTLGERWSDW 350
KPAAGQTWHS FNDYINFSDK TGWDKWWGKN WIRTDIGDYD NPGFDDLTMS 400
LAFLPDIKTE STTASGLPVF YKNKTDTHAK VIEGFTPRDY LTHWLSQWVR 450
DYGIDGFRVD TAKHVELPAW QQLKTEASAA LREWKKANPD KALDDKPFWM 500
TGEAWGHGVM QSDYYRHGFD AMINFDYQEQ AAKAVDCLAQ MDTTWQQMAE 550
KLQGFNVLSY LSSHDTRLFR EGGDKAAELL LLAPGAVQIF YGDESSRPFG 600
PTGSDPLQGT RSDMNWQDVS GKSAANVAHW QKISQFRARH PAIGAGKQTT 650
LSLKQGYGFV REHGDDKVLV IWAGQQ 676
Length:676
Mass (Da):75,728
Last modified:April 5, 2011 - v1
Checksum:i11B2B56ABF214C3E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002516 Genomic DNA. Translation: ADX48819.1.
CP002970 Genomic DNA. Translation: AFH15959.1.
RefSeqiYP_005275883.1. NC_016902.1.
YP_006163311.1. NC_017660.1.

Genome annotation databases

EnsemblBacteriaiADX48819; ADX48819; EKO11_0155.
AFH15959; AFH15959; KO11_04865.
GeneIDi11775199.
12761155.
KEGGiekf:KO11_04865.
eko:EKO11_0155.
PATRICi48640089. VBIEscCol13896_0154.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002516 Genomic DNA. Translation: ADX48819.1 .
CP002970 Genomic DNA. Translation: AFH15959.1 .
RefSeqi YP_005275883.1. NC_016902.1.
YP_006163311.1. NC_017660.1.

3D structure databases

ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADX48819 ; ADX48819 ; EKO11_0155 .
AFH15959 ; AFH15959 ; KO11_04865 .
GeneIDi 11775199.
12761155.
KEGGi ekf:KO11_04865.
eko:EKO11_0155.
PATRICi 48640089. VBIEscCol13896_0154.

Phylogenomic databases

KOi K01176.
OMAi GQNWHSF.

Enzyme and pathway databases

BioCyci ECOL595495:GI1Q-156-MONOMER.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
PIRSFi PIRSF036917. Alph_amls_MalS. 1 hit.
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 2 hits.
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of chromosome of Escherichia coli KO11."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Munk A.C., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Keating D., Landick R., Woyke T.
    Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 55124 / KO11 and KO11Imported.
  2. "Optical mapping and sequencing of the Escherichia coli KO11 genome reveal extensive chromosomal rearrangements, and multiple tandem copies of the Zymomonas mobilis pdc and adhB genes."
    Turner P.C., Yomano L.P., Jarboe L.R., York S.W., Baggett C.L., Moritz B.E., Zentz E.B., Shanmugam K.T., Ingram L.O.
    J. Ind. Microbiol. Biotechnol. 39:629-639(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: KO11FLImported.

Entry informationi

Entry nameiE8YB68_ECOKO
AccessioniPrimary (citable) accession number: E8YB68
Entry historyi
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: May 14, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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