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Protein

Superoxide dismutase

Gene

Rahaq_0042

Organism
Rahnella sp. (strain Y9602)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

GO - Molecular functioni

  1. metal ion binding Source: InterPro
  2. superoxide dismutase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotation

Enzyme and pathway databases

BioCyciRSP741091:GHHP-42-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:Rahaq_0042Imported
OrganismiRahnella sp. (strain Y9602)Imported
Taxonomic identifieri741091 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeRahnella
ProteomesiUP000007257: Chromosome

Structurei

3D structure databases

ProteinModelPortaliE8XSK1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000013583.
KOiK04564.
OMAiFWEVIAP.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E8XSK1-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSYSLPSLPY AYDALEPHFD KETMEIHHTK HHQAYVNNAN AALESLPELA
60 70 80 90 100
ALPVEELITK LDQVPADKKV ALRNNAGGHA NHSLFWKGLK TGTTLQGELK
110 120 130 140 150
SAIERDFGSV DAFKETFEKA ATTRFGSGWA WLVLKDGKLA VVSTANQDSP
160 170 180 190 200
LMGEAISGAS GYPLLGLDVW EHAYYLKYQN KRPDYIKAFW AVVNWDEAAK

RLAEAK
Length:206
Mass (Da):22,876
Last modified:April 5, 2011 - v1
Checksum:i4706DAFECB88B7AB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002505 Genomic DNA. Translation: ADW71675.1.
RefSeqiYP_004210802.1. NC_015061.1.

Genome annotation databases

EnsemblBacteriaiADW71675; ADW71675; Rahaq_0042.
GeneIDi10211001.
KEGGirah:Rahaq_0042.
PATRICi47398177. VBIRahSp167412_0038.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002505 Genomic DNA. Translation: ADW71675.1.
RefSeqiYP_004210802.1. NC_015061.1.

3D structure databases

ProteinModelPortaliE8XSK1.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADW71675; ADW71675; Rahaq_0042.
GeneIDi10211001.
KEGGirah:Rahaq_0042.
PATRICi47398177. VBIRahSp167412_0038.

Phylogenomic databases

HOGENOMiHOG000013583.
KOiK04564.
OMAiFWEVIAP.

Enzyme and pathway databases

BioCyciRSP741091:GHHP-42-MONOMER.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome of Rahnella sp. Y9602."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Lu M., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Sobecky P.A., Martinez R.J., Woyke T.
    Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Y9602Imported.

Entry informationi

Entry nameiE8XSK1_RAHSY
AccessioniPrimary (citable) accession number: E8XSK1
Entry historyi
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: January 7, 2015
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.