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E8XPG8

- E8XPG8_RAHSY

UniProt

E8XPG8 - E8XPG8_RAHSY

Protein

Xylose isomerase

Gene

Rahaq_0985

Organism
Rahnella sp. (strain Y9602)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 22 (01 Oct 2014)
      Sequence version 1 (05 Apr 2011)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    D-xylopyranose = D-xylulose.UniRule annotationSAAS annotation

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. xylose isomerase activity Source: UniProtKB-EC

    GO - Biological processi

    1. D-xylose metabolic process Source: UniProtKB-KW
    2. pentose-phosphate shunt Source: UniProtKB-KW

    Keywords - Molecular functioni

    IsomeraseUniRule annotationSAAS annotationImported

    Keywords - Biological processi

    Carbohydrate metabolism, Pentose shuntUniRule annotationSAAS annotation, Xylose metabolismUniRule annotationSAAS annotation

    Keywords - Ligandi

    Metal-bindingUniRule annotationSAAS annotation

    Enzyme and pathway databases

    BioCyciRSP741091:GHHP-1021-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
    Gene namesi
    Ordered Locus Names:Rahaq_0985Imported
    OrganismiRahnella sp. (strain Y9602)Imported
    Taxonomic identifieri741091 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeRahnella
    ProteomesiUP000007257: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Interactioni

    Subunit structurei

    Homotetramer.UniRule annotation

    Structurei

    3D structure databases

    ProteinModelPortaliE8XPG8.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the xylose isomerase family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000224339.
    KOiK01805.
    OMAiHTHWNSQ.

    Family and domain databases

    Gene3Di3.20.20.150. 1 hit.
    InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
    IPR001998. Xylose_isomerase.
    [Graphical view]
    PfamiPF01261. AP_endonuc_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF51658. SSF51658. 1 hit.
    PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E8XPG8-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSELKFATRL NSFASGAHLY WPEQKGKPSV LQMIERAATV KGLTHLDLNY    50
    PQHMTGDITL MRQKIEEVGL AVNGMQMRWD APEFKIGAFT HPDPKIRRQA 100
    IELTKRGIDA GREFGASIMT LWMGQDGFDY CFQADYKKIW EDAVSAVREV 150
    AEYAPDIDVS IEYKPNEPRA YSIFPNATTC LLAVEEAGCK NLGITLDFAH 200
    VLFANEVPAF AAAMVARRSR LLGLDLNDGW GKRDDGLMVG SVNPRATLEF 250
    LLQMKRDGYK GAYYFDTFPD ASGLDPVREA ETNIATVIRL LKLCEKLENN 300
    PALNEAISRQ DAVATQQIVN DVMLAQ 326
    Length:326
    Mass (Da):36,416
    Last modified:April 5, 2011 - v1
    Checksum:iCB5409DFA5190970
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002505 Genomic DNA. Translation: ADW72609.1.
    RefSeqiWP_013574314.1. NC_015061.1.
    YP_004211736.1. NC_015061.1.

    Genome annotation databases

    EnsemblBacteriaiADW72609; ADW72609; Rahaq_0985.
    GeneIDi10211979.
    KEGGirah:Rahaq_0985.
    PATRICi47400140. VBIRahSp167412_0982.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002505 Genomic DNA. Translation: ADW72609.1 .
    RefSeqi WP_013574314.1. NC_015061.1.
    YP_004211736.1. NC_015061.1.

    3D structure databases

    ProteinModelPortali E8XPG8.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADW72609 ; ADW72609 ; Rahaq_0985 .
    GeneIDi 10211979.
    KEGGi rah:Rahaq_0985.
    PATRICi 47400140. VBIRahSp167412_0982.

    Phylogenomic databases

    HOGENOMi HOG000224339.
    KOi K01805.
    OMAi HTHWNSQ.

    Enzyme and pathway databases

    BioCyci RSP741091:GHHP-1021-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.150. 1 hit.
    InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
    IPR001998. Xylose_isomerase.
    [Graphical view ]
    Pfami PF01261. AP_endonuc_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51658. SSF51658. 1 hit.
    PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of chromosome of Rahnella sp. Y9602."
      US DOE Joint Genome Institute
      Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Lu M., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Sobecky P.A., Martinez R.J., Woyke T.
      Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Y9602Imported.

    Entry informationi

    Entry nameiE8XPG8_RAHSY
    AccessioniPrimary (citable) accession number: E8XPG8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 5, 2011
    Last sequence update: April 5, 2011
    Last modified: October 1, 2014
    This is version 22 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3