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E8XPG8

- E8XPG8_RAHSY

UniProt

E8XPG8 - E8XPG8_RAHSY

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Protein
Xylose isomerase
Gene
Rahaq_0985
Organism
Rahnella sp. (strain Y9602)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

D-xylopyranose = D-xylulose.UniRule annotationSAAS annotations

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. xylose isomerase activity Source: UniProtKB-EC

GO - Biological processi

  1. D-xylose metabolic process Source: UniProtKB-KW
  2. pentose-phosphate shunt Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationSAAS annotationsImported

Keywords - Biological processi

Carbohydrate metabolism, Pentose shuntUniRule annotationSAAS annotations, Xylose metabolismUniRule annotationSAAS annotations

Keywords - Ligandi

Metal-bindingUniRule annotationSAAS annotations

Enzyme and pathway databases

BioCyciRSP741091:GHHP-1021-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
Gene namesi
Ordered Locus Names:Rahaq_0985Imported
OrganismiRahnella sp. (strain Y9602)Imported
Taxonomic identifieri741091 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeRahnella
ProteomesiUP000007257: Chromosome

Subcellular locationi

Cytoplasm By similarity UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Interactioni

Subunit structurei

Homotetramer By similarity.UniRule annotation

Structurei

3D structure databases

ProteinModelPortaliE8XPG8.

Family & Domainsi

Sequence similaritiesi

Belongs to the xylose isomerase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000224339.
KOiK01805.
OMAiHTHWNSQ.

Family and domain databases

Gene3Di3.20.20.150. 1 hit.
InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamiPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
SUPFAMiSSF51658. SSF51658. 1 hit.
PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E8XPG8-1 [UniParc]FASTAAdd to Basket

« Hide

MSELKFATRL NSFASGAHLY WPEQKGKPSV LQMIERAATV KGLTHLDLNY    50
PQHMTGDITL MRQKIEEVGL AVNGMQMRWD APEFKIGAFT HPDPKIRRQA 100
IELTKRGIDA GREFGASIMT LWMGQDGFDY CFQADYKKIW EDAVSAVREV 150
AEYAPDIDVS IEYKPNEPRA YSIFPNATTC LLAVEEAGCK NLGITLDFAH 200
VLFANEVPAF AAAMVARRSR LLGLDLNDGW GKRDDGLMVG SVNPRATLEF 250
LLQMKRDGYK GAYYFDTFPD ASGLDPVREA ETNIATVIRL LKLCEKLENN 300
PALNEAISRQ DAVATQQIVN DVMLAQ 326
Length:326
Mass (Da):36,416
Last modified:April 5, 2011 - v1
Checksum:iCB5409DFA5190970
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002505 Genomic DNA. Translation: ADW72609.1.
RefSeqiWP_013574314.1. NC_015061.1.
YP_004211736.1. NC_015061.1.

Genome annotation databases

EnsemblBacteriaiADW72609; ADW72609; Rahaq_0985.
GeneIDi10211979.
KEGGirah:Rahaq_0985.
PATRICi47400140. VBIRahSp167412_0982.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002505 Genomic DNA. Translation: ADW72609.1 .
RefSeqi WP_013574314.1. NC_015061.1.
YP_004211736.1. NC_015061.1.

3D structure databases

ProteinModelPortali E8XPG8.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADW72609 ; ADW72609 ; Rahaq_0985 .
GeneIDi 10211979.
KEGGi rah:Rahaq_0985.
PATRICi 47400140. VBIRahSp167412_0982.

Phylogenomic databases

HOGENOMi HOG000224339.
KOi K01805.
OMAi HTHWNSQ.

Enzyme and pathway databases

BioCyci RSP741091:GHHP-1021-MONOMER.

Family and domain databases

Gene3Di 3.20.20.150. 1 hit.
InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
IPR001998. Xylose_isomerase.
[Graphical view ]
Pfami PF01261. AP_endonuc_2. 1 hit.
[Graphical view ]
SUPFAMi SSF51658. SSF51658. 1 hit.
PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of chromosome of Rahnella sp. Y9602."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Lu M., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Sobecky P.A., Martinez R.J., Woyke T.
    Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Y9602.

Entry informationi

Entry nameiE8XPG8_RAHSY
AccessioniPrimary (citable) accession number: E8XPG8
Entry historyi
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: September 3, 2014
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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