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Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Rahnella sp. (strain Y9602)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotation

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotation

Cofactori

Mg2+UniRule annotationSAAS annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei137 – 1371UniRule annotation
Active sitei545 – 5451UniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. carbon fixation Source: UniProtKB-HAMAP
  2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
  3. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotation

Keywords - Biological processi

Carbon dioxide fixationUniRule annotationSAAS annotation

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotation, PyruvateImported

Enzyme and pathway databases

BioCyciRSP741091:GHHP-4400-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylaseUniRule annotationSAAS annotation (EC:4.1.1.31UniRule annotationSAAS annotation)
Short name:
PEPCUniRule annotation
Short name:
PEPCaseUniRule annotation
Gene namesi
Name:ppcUniRule annotation
Ordered Locus Names:Rahaq_4301Imported
OrganismiRahnella sp. (strain Y9602)Imported
Taxonomic identifieri741091 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeRahnella
ProteomesiUP000007257 Componenti: Chromosome

Interactioni

Subunit structurei

Homotetramer.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000238648.
KOiK01595.
OMAiCGMGVIA.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E8XMQ6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNEQYSAMRS NVSTLGKLLG DTIKDTLGEH ILDRVEKIRK LSKSSRAGND
60 70 80 90 100
ADRQELLSTL QNLSNDELLP VARAFSQFLN LANVAEQYHS ISPHGEAASN
110 120 130 140 150
PEALAQLFDR LKSKNLSEQQ LRDAVDQLSI ELVLTAHPTE IARRTLIHKL
160 170 180 190 200
VEVNNCLKQL DHNDLADYER KQIMRRLRQL IAQSWHTDEI RKNRPSPVDE
210 220 230 240 250
AKWGFAVVEN SLWEGVPAFL RELNEQLETS LDYKMPVEAV PVRFTSWMGG
260 270 280 290 300
DRDGNPNVTA DITRHVLLLS RWKATDLFLR DIAVLVSELS MTECTPELRE
310 320 330 340 350
LAGGADIIEP YREIMKQLRS QLTNTQVYLE ARLKGERVAR PHDLLVKNDQ
360 370 380 390 400
LWAPLYACYQ SLQACNMGII ANGQLLDTLR RVRCFGVPLV RIDVRQESTR
410 420 430 440 450
HTDAIAEITR YLGLGDYESW SESDKQAFLI RELNSKRPLV PRHWEPSANT
460 470 480 490 500
KEVLDTCQVI AEAPEGSIAA YVISMARTPS DVLAVHLLLK EAGCPFPMPV
510 520 530 540 550
APLFETLDDL NNADDVMKQL LSIDWYRGFI QGKQMVMIGY SDSAKDAGVM
560 570 580 590 600
AASWAQYRAQ DALIKTCEKA GIALTLFHGR GGSIGRGGAP AQAALLSQPP
610 620 630 640 650
GSLKGGLRVT EQGEMIRFKF GLPEVTISSL ALYTSAILEA NLLPPPEPKQ
660 670 680 690 700
AWVDIMEQLS DVSCKMYRGY VRENKDFVPY FRAATPEQEL AKLPLGSRPA
710 720 730 740 750
KRKASGGVES LRAIPWIFAW TQNRLMLPAW LGAGAGLQAV VDDGKRDELE
760 770 780 790 800
TMCRDWPFFS TRIGMLEMVF AKADLWLAEY YDHRLVGKEL WPLGQQLRDQ
810 820 830 840 850
LASDIKVILA ISNDDHLMED LPWIAESIAL RNVYTDPLNV LQAELLHRSR
860 870 880
ELEKDGKQDA NVEQALMVTI AGVAAGMRNT G
Length:881
Mass (Da):98,793
Last modified:April 5, 2011 - v1
Checksum:iECA72AE2CB66F53A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002505 Genomic DNA. Translation: ADW75887.1.
RefSeqiYP_004215014.1. NC_015061.1.

Genome annotation databases

EnsemblBacteriaiADW75887; ADW75887; Rahaq_4301.
KEGGirah:Rahaq_4301.
PATRICi47406881. VBIRahSp167412_4283.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002505 Genomic DNA. Translation: ADW75887.1.
RefSeqiYP_004215014.1. NC_015061.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADW75887; ADW75887; Rahaq_4301.
KEGGirah:Rahaq_4301.
PATRICi47406881. VBIRahSp167412_4283.

Phylogenomic databases

HOGENOMiHOG000238648.
KOiK01595.
OMAiCGMGVIA.

Enzyme and pathway databases

BioCyciRSP741091:GHHP-4400-MONOMER.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome of Rahnella sp. Y9602."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Lu M., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Sobecky P.A., Martinez R.J., Woyke T.
    Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Y9602Imported.

Entry informationi

Entry nameiE8XMQ6_RAHSY
AccessioniPrimary (citable) accession number: E8XMQ6
Entry historyi
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: April 29, 2015
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.