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Protein
Submitted name:

Cytoplasmic alpha-amylase

Gene

amyA

Organism
Salmonella typhimurium (strain 4/74)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei235 – 2351NucleophileUniRule annotation
Active sitei265 – 2651Proton donorUniRule annotation

GO - Molecular functioni

  1. calcium ion binding Source: InterPro
  2. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciSENT909946:GLJU-1983-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Cytoplasmic alpha-amylaseImported
Gene namesi
Name:amyAImported
Ordered Locus Names:STM474_1995Imported
OrganismiSalmonella typhimurium (strain 4/74)Imported
Taxonomic identifieri909946 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeSalmonella
ProteomesiUP000008978 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliE8XAA6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

OMAiFFHWYYP.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

E8XAA6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKNPTLLQYF HWYYPDGGKL WSELAERADG LNDIGINMVW LPPACKGASG
60 70 80 90 100
GYSVGYDTYD LFDLGEFDQK GTIATKYGDK RQLLTAIDAL KKNNIAVLLD
110 120 130 140 150
VVVNHKMGAD EKERIRVQRV NQDDRTQIDD NIIECEGWTR YTFPARAGQY
160 170 180 190 200
SNFIWDYHCF SGIDHIENPD EDGIFKIVND YTGDGWNDQV DDEMGNFDYL
210 220 230 240 250
MGENIDFRNH AVTEEIKYWA RWVMEQTHCD GFRLDAVKHI PAWFYKEWIE
260 270 280 290 300
HVQAVAPKPL FIVAEYWSHE VDKLQTYIDQ VDGKTMLFDA PLQMKFHEAS
310 320 330 340 350
RQGAEYDMRH IFTGTLVEAD PFHAVTLVAN HDTQPLQALE APVEPWFKPL
360 370 380 390 400
AYALILLREN GVPSVFYPDL YGASYEDSGE NGETCRVDMP VINQLDRLIL
410 420 430 440 450
ARQRFAHGIQ TLFFDHPNCI AFSRSGTEEN PGCVVVLSNG DDGEKTLLLG
460 470 480 490
DNYANKTWRD FLGNRDEYVV TNDQGEATFF CNAGSVSVWV IEDV
Length:494
Mass (Da):56,522
Last modified:April 4, 2011 - v1
Checksum:i5C1E862FEDD5E47C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002487 Genomic DNA. Translation: ADX17672.1.
RefSeqiYP_005242871.1. NC_016857.1.

Genome annotation databases

EnsemblBacteriaiADX17672; ADX17672; STM474_1995.
PATRICi47195541. VBISalEnt171491_2038.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002487 Genomic DNA. Translation: ADX17672.1.
RefSeqiYP_005242871.1. NC_016857.1.

3D structure databases

ProteinModelPortaliE8XAA6.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADX17672; ADX17672; STM474_1995.
PATRICi47195541. VBISalEnt171491_2038.

Phylogenomic databases

OMAiFFHWYYP.

Enzyme and pathway databases

BioCyciSENT909946:GLJU-1983-MONOMER.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genome sequences of Salmonella enterica serovar typhimurium, Choleraesuis, Dublin, and Gallinarum strains of well- defined virulence in food-producing animals."
    Richardson E.J., Limaye B., Inamdar H., Datta A., Manjari K.S., Pullinger G.D., Thomson N.R., Joshi R.R., Watson M., Stevens M.P.
    J. Bacteriol. 193:3162-3163(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 4/74Imported.

Entry informationi

Entry nameiE8XAA6_SALT4
AccessioniPrimary (citable) accession number: E8XAA6
Entry historyi
Integrated into UniProtKB/TrEMBL: April 4, 2011
Last sequence update: April 4, 2011
Last modified: February 3, 2015
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.