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Protein

Elongation factor Tu

Gene

tuf

Organism
Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.UniRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi19 – 268GTPUniRule annotation
Nucleotide bindingi82 – 865GTPUniRule annotation
Nucleotide bindingi137 – 1404GTPUniRule annotation

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Elongation factorUniRule annotationImported

Keywords - Biological processi

Protein biosynthesis

Keywords - Ligandi

GTP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Elongation factor TuUniRule annotation
Short name:
EF-TuUniRule annotation
Gene namesi
Name:tufUniRule annotation
Ordered Locus Names:AciX9_0917Imported, AciX9_2957Imported
OrganismiGranulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9)Imported
Taxonomic identifieri1198114 [NCBI]
Taxonomic lineageiBacteriaAcidobacteriaAcidobacterialesAcidobacteriaceaeGranulicella
ProteomesiUP000000343 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotation

Interactioni

Subunit structurei

Monomer.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000229290.
KOiK02358.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
HAMAPiMF_00118_B. EF_Tu_B.
InterProiIPR031157. G_TR_CS.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR000795. TF_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamiPF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSiPR00315. ELONGATNFCT.
SUPFAMiSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEiPS00301. G_TR_1. 1 hit.
PS51722. G_TR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E8WZK6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGKEKFDRSK PHVNIGTVGH IDHGKTTLTA AITKVLSKHN PNNTFRSFDT
60 70 80 90 100
IDNAPEERER GITIATSHVE YETANRHYAH VDCPGHADYI KNMITGAAQM
110 120 130 140 150
DGAILVVAAT DGPMPQTKEH VLLARQVGVP YIVVFLNKCD AVEDEELIEL
160 170 180 190 200
VEMEVRELLS KYDYPGDDTP IIRGSALGAL NGEPQWEAKI DELMAAVDQY
210 220 230 240 250
IPQPERAINL PFLMPIEDIF SISGRGTVVT GRIERGKVKV GEACEIVGFG
260 270 280 290 300
DTQATVCTGV EMFKKQLDEG LAGDNAGLLL RGVAKEAVQR GMVLAKPGSI
310 320 330 340 350
KPHTEFKGEV YVLSKEEGGR HTPFFNGYRP QFYFRTTDVT GSAKLPEGTE
360 370 380 390
MCMPGDNIQL EITLHTPVAM EKGLRFAIRE GGRTVGAGTI SEIIK
Length:395
Mass (Da):43,218
Last modified:April 5, 2011 - v1
Checksum:iDFCBF140CD42856B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002480 Genomic DNA. Translation: ADW67984.1.
CP002480 Genomic DNA. Translation: ADW69980.1.
RefSeqiWP_013579308.1. NC_015064.1.
YP_004216764.1. NC_015064.1.
YP_004218760.1. NC_015064.1.

Genome annotation databases

EnsemblBacteriaiADW67984; ADW67984; AciX9_0917.
ADW69980; ADW69980; AciX9_2957.
KEGGiacm:AciX9_0917.
acm:AciX9_2957.
PATRICi46819337. VBIAciSp155132_1585.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002480 Genomic DNA. Translation: ADW67984.1.
CP002480 Genomic DNA. Translation: ADW69980.1.
RefSeqiWP_013579308.1. NC_015064.1.
YP_004216764.1. NC_015064.1.
YP_004218760.1. NC_015064.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADW67984; ADW67984; AciX9_0917.
ADW69980; ADW69980; AciX9_2957.
KEGGiacm:AciX9_0917.
acm:AciX9_2957.
PATRICi46819337. VBIAciSp155132_1585.

Phylogenomic databases

HOGENOMiHOG000229290.
KOiK02358.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
HAMAPiMF_00118_B. EF_Tu_B.
InterProiIPR031157. G_TR_CS.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR000795. TF_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamiPF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSiPR00315. ELONGATNFCT.
SUPFAMiSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEiPS00301. G_TR_1. 1 hit.
PS51722. G_TR_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Complete sequence of chromosome of Acidobacterium sp. MP5ACTX9."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Rawat S.R., Mannisto M., Haggblom M.M., Woyke T.
    Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MP5ACTX9Imported.
  2. "Complete sequence of chromosome of Granulicella sp. MP5ACTX9."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Rawat S.R., Mannisto M., Haggblom M.M., Woyke T.
    Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: MP5ACTX9Imported.

Entry informationi

Entry nameiE8WZK6_GRATM
AccessioniPrimary (citable) accession number: E8WZK6
Entry historyi
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: June 24, 2015
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.