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E8WTK5 (E8WTK5_GEOS8) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Elongation factor Tu HAMAP-Rule MF_00118

Short name=EF-Tu HAMAP-Rule MF_00118
Gene names
Name:tuf HAMAP-Rule MF_00118
Ordered Locus Names:GM18_0817 EMBL ADW12296.1, GM18_0830 EMBL ADW12309.1
OrganismGeobacter sp. (strain M18) [Complete proteome] [HAMAP] EMBL ADW12296.1
Taxonomic identifier443143 [NCBI]
Taxonomic lineageBacteriaProteobacteriaDeltaproteobacteriaDesulfuromonadalesGeobacteraceaeGeobacter

Protein attributes

Sequence length396 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. RuleBase RU000325 HAMAP-Rule MF_00118

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. RuleBase RU000325 HAMAP-Rule MF_00118

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding81 – 855GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding136 – 1394GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
E8WTK5 [UniParc].

Last modified April 5, 2011. Version 1.
Checksum: EB6D910757AF60AE

FASTA39643,008
        10         20         30         40         50         60 
MAKAKFERTK PHVNIGTIGH VDHGKTTLTA AITKVLAGKG QAEFKAFDQI DNAPEERERG 

        70         80         90        100        110        120 
ITIATAHVEY ETDKRHYAHV DCPGHADYVK NMITGAAQMD GAILVVSAAD GPMPQTREHI 

       130        140        150        160        170        180 
LLARQVGVPY IVVFLNKADM VDDEELLELV ELEVRELLSS YDFPGDDIPI IKGSALKGLE 

       190        200        210        220        230        240 
GDKGELGEEA ILKLMDAVDS YIPEPVRAID KPFLMPVEDV FSISGRGTVA TGRVERGIVK 

       250        260        270        280        290        300 
VGEEVEIVGM KATTKTTVTG VEMFRKLLDE GRAGDNIGAL LRGVKREDIE RGQVLAKPGS 

       310        320        330        340        350        360 
ITPHTKFKAE AYILSKEEGG RHTPFFNGYR PQFYFRTTDV TGVVDLEAGV EMVMPGDNVS 

       370        380        390 
VVVNLITPIA MDEGLRFAIR EGGRTVGAGV VASIIE 

« Hide

References

[1]"Complete sequence of Geobacter sp. M18."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Chertkov O., Munk C., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Holmes D. expand/collapse author list , Aklujkar M., Lovley D., Woyke T.
Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: M18 EMBL ADW12296.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002479 Genomic DNA. Translation: ADW12296.1.
CP002479 Genomic DNA. Translation: ADW12309.1.
RefSeqYP_004197572.1. NC_014973.1.
YP_004197585.1. NC_014973.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADW12296; ADW12296; GM18_0817.
ADW12309; ADW12309; GM18_0830.
GeneID10196397.
10196411.
KEGGgeb:GM18_0817.
geb:GM18_0830.
PATRIC46945513. VBIGeoSp68312_0816.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000229290.
KOK02358.
OMAGTEMCMP.

Enzyme and pathway databases

BioCycGSP443143:GHZL-837-MONOMER.
GSP443143:GHZL-851-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE8WTK5_GEOS8
AccessionPrimary (citable) accession number: E8WTK5
Entry history
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: June 11, 2014
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)