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E8WRR7 (E8WRR7_GEOS8) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Alpha-amylase RuleBase RU361134

EC=3.2.1.1 RuleBase RU361134
Gene names
Ordered Locus Names:GM18_3857 EMBL ADW15282.1
OrganismGeobacter sp. (strain M18) [Complete proteome] [HAMAP] EMBL ADW15282.1
Taxonomic identifier443143 [NCBI]
Taxonomic lineageBacteriaProteobacteriaDeltaproteobacteriaDesulfuromonadalesGeobacteraceaeGeobacter

Protein attributes

Sequence length439 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units. RuleBase RU361134

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Keywords
   Biological processCarbohydrate metabolism RuleBase RU361134
   Molecular functionGlycosidase RuleBase RU361134
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
E8WRR7 [UniParc].

Last modified April 5, 2011. Version 1.
Checksum: C1393BFE682E1FE4

FASTA43950,849
        10         20         30         40         50         60 
MQDVILHAFD WHYDDIAENA KKIAELGYGA ILIAPPLYSD ERGPEWWQRY QPKDYRVVRS 

        70         80         90        100        110        120 
YLGGKKQLEQ AIQALHASNV RVYADVVFNH MANEKSARND PYNFPGDREL ARYLSEAESF 

       130        140        150        160        170        180 
ERDRLYGDLS VGLFCQRDFN PQGDICNWND LHESQELWLS GLPDLDLNDW VVEQQKACLS 

       190        200        210        220        230        240 
ALNRLGFDGY RIDAIKHLPY DHIARVFQTE ILNGKFVFGE ALTCNDHEEC LFLWPLLYIT 

       250        260        270        280        290        300 
SISFYDFPLH ETLRRTFSTT GSMRELVNPA ANGQALHWSR AVTFSITHDI PNNDGFRWQM 

       310        320        330        340        350        360 
LDPQDEFLAN VYIMGRDGGI PLVFSDHNQS AARYNSDRNR WNEAWSRQDT AGMIAFHNAV 

       370        380        390        400        410        420 
HGTPQRPLFE HDGFIVFARG DRGIVAINKT DEWQHPRIWT NGLKQGRYHC MIHGYDMQVS 

       430 
GEWFDLGIPP RQAQMWLGN 

« Hide

References

[1]"Complete sequence of Geobacter sp. M18."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Chertkov O., Munk C., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Holmes D. expand/collapse author list , Aklujkar M., Lovley D., Woyke T.
Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: M18 EMBL ADW15282.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002479 Genomic DNA. Translation: ADW15282.1.
RefSeqYP_004200558.1. NC_014973.1.

3D structure databases

ProteinModelPortalE8WRR7.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADW15282; ADW15282; GM18_3857.
GeneID10199488.
KEGGgeb:GM18_3857.
PATRIC46951661. VBIGeoSp68312_3825.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000274290.
KOK01176.
OMADLDPNNW.

Enzyme and pathway databases

BioCycGSP443143:GHZL-3929-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameE8WRR7_GEOS8
AccessionPrimary (citable) accession number: E8WRR7
Entry history
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: July 9, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)