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Protein
Submitted name:

DNA polymerase LigD, polymerase domain protein

Gene

Sfla_1982

Organism
Streptomyces pratensis (strain ATCC 33331 / IAF-45CD)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciSFLA591167:GI5Y-1997-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA polymerase LigD, polymerase domain proteinImported
Gene namesi
Ordered Locus Names:Sfla_1982Imported
OrganismiStreptomyces pratensis (strain ATCC 33331 / IAF-45CD)Imported
Taxonomic identifieri591167 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptomycineaeStreptomycetaceaeStreptomyces
ProteomesiUP000002066: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

InterProiIPR014145. LigD_pol.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.

Sequencei

Sequence statusi: Complete.

E8WBR0-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MTPIAEVEGR RLTLSNLDKV LYPATGTTKG EVLHYYAATA ARVMLPHLRD
60 70 80 90 100
RPLSFLRYPD GPEGLRFFTK NPPPGTPDWV RTAPVPRSDD PGARQVLAQD
110 120 130 140 150
LPSLMWAANL VVEFHTHQWR QDSPAVADRM VFDLDPGPPA GVVECCAVAL
160 170 180 190 200
WLRERLAGDG LSAHGKTSGS KGLHLLVPLE PTPSGKVTAY AKKLAVEAQG
210 220 230 240 250
ALPELAVHRM TRALRPGKVF VDFSQNAAAK TTAAPYTLRA KARPTVSAPV
260 270 280 290
TWEEIEECGA PDDLVLLAGD MAARLERHGD LLAPLNDPGQ AGALPGG
Length:297
Mass (Da):31,903
Last modified:April 5, 2011 - v1
Checksum:iDDBEA80F32EBF7DD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002475 Genomic DNA. Translation: ADW03416.1.
RefSeqiYP_004922933.1. NC_016114.1.

Genome annotation databases

EnsemblBacteriaiADW03416; ADW03416; Sfla_1982.
GeneIDi11365909.
KEGGisfa:Sfla_1982.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002475 Genomic DNA. Translation: ADW03416.1.
RefSeqiYP_004922933.1. NC_016114.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADW03416; ADW03416; Sfla_1982.
GeneIDi11365909.
KEGGisfa:Sfla_1982.

Phylogenomic databases

KOiK01971.

Enzyme and pathway databases

BioCyciSFLA591167:GI5Y-1997-MONOMER.

Family and domain databases

InterProiIPR014145. LigD_pol.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome of Streptomyces flavogriseus ATCC 33331."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pagani I., Brumm P., Mead D., Woyke T.
    Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 33331 / DSM 40990 / IAF-45CDImported.

Entry informationi

Entry nameiE8WBR0_STRFA
AccessioniPrimary (citable) accession number: E8WBR0
Entry historyi
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: January 7, 2015
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.