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Protein

Alpha-amylase

Gene

VVMO6_03877

Organism
Vibrio vulnificus (strain MO6-24/O)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. cation binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotationImported, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Enzyme and pathway databases

BioCyciVVUL914127:GJJH-4012-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:VVMO6_03877Imported
OrganismiVibrio vulnificus (strain MO6-24/O)Imported
Taxonomic identifieri914127 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000006905: Chromosome II

Structurei

3D structure databases

ProteinModelPortaliE8VUN4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

E8VUN4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKPSKFVFLS AAIACSLSST ANADAILHAF NWKYSDVTQN ASQIAAAGYK
60 70 80 90 100
KVLISPALKS SGNEWWARYQ PQDLRVIDSP LGNKSDLKSM IDALKAVGVD
110 120 130 140 150
VYADVVLNHM ANETWKREDL NYPGSEVLQQ YAANTSYYAD QTLFGNLTEN
160 170 180 190 200
LFSGFDFHPE GCISDWNDAG NVQYWRLCGG AGDRGLPDLD PNNWVVSQQR
210 220 230 240 250
LYLNALKGLG VKGFRIDAVK HMSQYQIDQI FTAEITAGMH VFGEVITSGG
260 270 280 290 300
KGDSSYENFL APYLNATNHS AYDFPLFASI RNAFSYSGGM NMLHDPQAYG
310 320 330 340 350
QGLENARSIT FTITHDIPTN DGFRYQIMDP KDEELAYAYI LGKDGGTPLI
360 370 380 390 400
YSDNLPDNED RDNRRWEGVW NRDLMKNMLR FHNQMQGQEM TMLYSDQCLL
410 420 430 440 450
MFKRGKQGVV GINKCGEERS HTVDTYQHEF NWYQPYTDTL TGVTETVSSR
460
YHTFRIPARS ARMYML
Length:466
Mass (Da):52,612
Last modified:April 5, 2011 - v1
Checksum:iEEBD1F932D3C1A04
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002470 Genomic DNA. Translation: ADV88899.1.
RefSeqiYP_004191102.1. NC_014966.1.

Genome annotation databases

EnsemblBacteriaiADV88899; ADV88899; VVMO6_03877.
GeneIDi10168708.
KEGGivvm:VVMO6_03877.
PATRICi47055899. VBIVibVul176069_3856.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002470 Genomic DNA. Translation: ADV88899.1.
RefSeqiYP_004191102.1. NC_014966.1.

3D structure databases

ProteinModelPortaliE8VUN4.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADV88899; ADV88899; VVMO6_03877.
GeneIDi10168708.
KEGGivvm:VVMO6_03877.
PATRICi47055899. VBIVibVul176069_3856.

Phylogenomic databases

KOiK01176.

Enzyme and pathway databases

BioCyciVVUL914127:GJJH-4012-MONOMER.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MO6-24/OImported.

Entry informationi

Entry nameiE8VUN4_VIBVM
AccessioniPrimary (citable) accession number: E8VUN4
Entry historyi
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: January 7, 2015
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.