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E8VIV9

- E8VIV9_BACST

UniProt

E8VIV9 - E8VIV9_BACST

Protein
Submitted name:

ATP-dependent DNA ligase

Gene

ligD

Organism
Bacillus subtilis (strain BSn5)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 22 (01 Oct 2014)
      Sequence version 1 (05 Apr 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciBSUB936156:GHCY-3829-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligaseImported (EC:6.5.1.1Imported)
    Gene namesi
    Name:ligDImported
    Ordered Locus Names:BSn5_18735Imported
    OrganismiBacillus subtilis (strain BSn5)Imported
    Taxonomic identifieri936156 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
    ProteomesiUP000007474: Chromosome

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000008893.
    KOiK01971.

    Family and domain databases

    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014145. LigD_pol.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E8VIV9-1 [UniParc]FASTAAdd to Basket

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    MAFTMQPVLT SSPPIGAEWR YEVKYDGYRC ILRIHSSGVT LTSRNGVELS    50
    STFPEITQFA KTAFQHMEKE LPLTLDGEIV CLVNPCRADF EHLQVRGRLK 100
    RPDKIQESAN ARPCCFLAFD LLERSGEDVT LLSYLDRKKS LRELISAAKL 150
    PASPDPYAKE TIQSIPCYDH FDQLWEMVIK YDGEGIVAKK TNSKWLEKKR 200
    SSDWLKYKNF KQAYVCITGF NPNNGFLTVS VLKNGIMTPI ASVSHGMRDE 250
    EKSAIRKIME QHGQQTPSGE FTLEPSICAA VQYLTILQGT LREVSFIGFE 300
    FQMDWTECTY AQVIRHSKPV HPKLQFTSLD KIIFEKNKKT KEDFIQYMIE 350
    VSDYLLPFLK NRAVTVIRYP HGSRSESFFQ KNKPDYAPDF VQSFYDGSHE 400
    HIVCEDMSTL LWLCNQLALE FHVPFQTIKS RRPAEIVIDL DPPSRDDFLM 450
    AVQAANELKR LLDSFGITSY PKLSGNKGIQ LYIPLSPEAF TYEETRHFTQ 500
    LIAEYCTNAF PELFTTERLI KNRHGKLYLD YLQHAEGKTI ICPYSTRGNE 550
    LGTVAAPLYW HEVQSSLTPA LFTIDTVIDR IKKQGCPFFD FYRNPQDEPL 600
    SAILHQLKKK S 611
    Length:611
    Mass (Da):70,175
    Last modified:April 5, 2011 - v1
    Checksum:iACFEF9CD12A44828
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002468 Genomic DNA. Translation: ADV96353.1.
    RefSeqiWP_015715773.1. NC_014976.1.
    YP_004207380.1. NC_014976.1.

    Genome annotation databases

    EnsemblBacteriaiADV96353; ADV96353; BSn5_18735.
    GeneIDi10184477.
    KEGGibsn:BSn5_18735.
    PATRICi46874974. VBIBacSub180317_3824.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002468 Genomic DNA. Translation: ADV96353.1 .
    RefSeqi WP_015715773.1. NC_014976.1.
    YP_004207380.1. NC_014976.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADV96353 ; ADV96353 ; BSn5_18735 .
    GeneIDi 10184477.
    KEGGi bsn:BSn5_18735.
    PATRICi 46874974. VBIBacSub180317_3824.

    Phylogenomic databases

    HOGENOMi HOG000008893.
    KOi K01971.

    Enzyme and pathway databases

    BioCyci BSUB936156:GHCY-3829-MONOMER.

    Family and domain databases

    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014145. LigD_pol.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of Bacillus subtilis BSn5, an endophytic bacterium of Amorphophallus konjac with antimicrobial activity to plant pathogen Erwinia carotovora subsp. carotovora."
      Deng Y., Zhu Y., Wang P., Zhu L., Zheng J., Li R., Ruan L., Peng D., Sun M.
      J. Bacteriol. 193:2070-2071(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: BSn5Imported.
    2. "Complete Genome Sequence of Bacillus Subtilis BSn5, a Strain of Plant-associated Bacterium with Antimicrobial Activity to Soil-borne Plant Pathogens."
      Deng Y., Sun M.
      Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: BSn5.

    Entry informationi

    Entry nameiE8VIV9_BACST
    AccessioniPrimary (citable) accession number: E8VIV9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 5, 2011
    Last sequence update: April 5, 2011
    Last modified: October 1, 2014
    This is version 22 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3