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E8VIV9

- E8VIV9_BACST

UniProt

E8VIV9 - E8VIV9_BACST

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Protein
Submitted name: ATP-dependent DNA ligase
Gene
ligD, BSn5_18735
Organism
Bacillus subtilis (strain BSn5)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciBSUB936156:GHCY-3829-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
Name:ligDImported
Ordered Locus Names:BSn5_18735Imported
OrganismiBacillus subtilis (strain BSn5)Imported
Taxonomic identifieri936156 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000007474: Chromosome

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000008893.
KOiK01971.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014145. LigD_pol.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E8VIV9-1 [UniParc]FASTAAdd to Basket

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MAFTMQPVLT SSPPIGAEWR YEVKYDGYRC ILRIHSSGVT LTSRNGVELS    50
STFPEITQFA KTAFQHMEKE LPLTLDGEIV CLVNPCRADF EHLQVRGRLK 100
RPDKIQESAN ARPCCFLAFD LLERSGEDVT LLSYLDRKKS LRELISAAKL 150
PASPDPYAKE TIQSIPCYDH FDQLWEMVIK YDGEGIVAKK TNSKWLEKKR 200
SSDWLKYKNF KQAYVCITGF NPNNGFLTVS VLKNGIMTPI ASVSHGMRDE 250
EKSAIRKIME QHGQQTPSGE FTLEPSICAA VQYLTILQGT LREVSFIGFE 300
FQMDWTECTY AQVIRHSKPV HPKLQFTSLD KIIFEKNKKT KEDFIQYMIE 350
VSDYLLPFLK NRAVTVIRYP HGSRSESFFQ KNKPDYAPDF VQSFYDGSHE 400
HIVCEDMSTL LWLCNQLALE FHVPFQTIKS RRPAEIVIDL DPPSRDDFLM 450
AVQAANELKR LLDSFGITSY PKLSGNKGIQ LYIPLSPEAF TYEETRHFTQ 500
LIAEYCTNAF PELFTTERLI KNRHGKLYLD YLQHAEGKTI ICPYSTRGNE 550
LGTVAAPLYW HEVQSSLTPA LFTIDTVIDR IKKQGCPFFD FYRNPQDEPL 600
SAILHQLKKK S 611
Length:611
Mass (Da):70,175
Last modified:April 5, 2011 - v1
Checksum:iACFEF9CD12A44828
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002468 Genomic DNA. Translation: ADV96353.1.
RefSeqiWP_015715773.1. NC_014976.1.
YP_004207380.1. NC_014976.1.

Genome annotation databases

EnsemblBacteriaiADV96353; ADV96353; BSn5_18735.
GeneIDi10184477.
KEGGibsn:BSn5_18735.
PATRICi46874974. VBIBacSub180317_3824.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002468 Genomic DNA. Translation: ADV96353.1 .
RefSeqi WP_015715773.1. NC_014976.1.
YP_004207380.1. NC_014976.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADV96353 ; ADV96353 ; BSn5_18735 .
GeneIDi 10184477.
KEGGi bsn:BSn5_18735.
PATRICi 46874974. VBIBacSub180317_3824.

Phylogenomic databases

HOGENOMi HOG000008893.
KOi K01971.

Enzyme and pathway databases

BioCyci BSUB936156:GHCY-3829-MONOMER.

Family and domain databases

InterProi IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014145. LigD_pol.
IPR014143. NHEJ_ligase_prk.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Complete genome sequence of Bacillus subtilis BSn5, an endophytic bacterium of Amorphophallus konjac with antimicrobial activity for the plant pathogen Erwinia carotovora subsp. carotovora."
    Deng Y., Zhu Y., Wang P., Zhu L., Zheng J., Li R., Ruan L., Peng D., Sun M.
    J. Bacteriol. 193:2070-2071(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BSn5Imported.
  2. "Complete Genome Sequence of Bacillus Subtilis BSn5, a Strain of Plant-associated Bacterium with Antimicrobial Activity to Soil-borne Plant Pathogens."
    Deng Y., Sun M.
    Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BSn5.

Entry informationi

Entry nameiE8VIV9_BACST
AccessioniPrimary (citable) accession number: E8VIV9
Entry historyi
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: September 3, 2014
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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