E8VIV9 (E8VIV9_BACST) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP-dependent DNA ligase EMBL ADV96353.1
EC=6.5.1.1 EMBL ADV96353.1

Gene names

Name:	ligD EMBL ADV96353.1
Ordered Locus Names:	BSn5_18735

Organism

Bacillus subtilis (strain BSn5) [Complete proteome] [HAMAP]

Taxonomic identifier

936156 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Bacilli › Bacillales › Bacillaceae › Bacillus › Bacillus subtilis group › Bacillus subtilis

Protein attributes

Sequence length	611 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ADV96353.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E8VIV9 [UniParc]. Last modified April 5, 2011. Version 1. Checksum: ACFEF9CD12A44828	FASTA	611	70,175
	10 20 30 40 50 60 MAFTMQPVLT SSPPIGAEWR YEVKYDGYRC ILRIHSSGVT LTSRNGVELS STFPEITQFA 70 80 90 100 110 120 KTAFQHMEKE LPLTLDGEIV CLVNPCRADF EHLQVRGRLK RPDKIQESAN ARPCCFLAFD 130 140 150 160 170 180 LLERSGEDVT LLSYLDRKKS LRELISAAKL PASPDPYAKE TIQSIPCYDH FDQLWEMVIK 190 200 210 220 230 240 YDGEGIVAKK TNSKWLEKKR SSDWLKYKNF KQAYVCITGF NPNNGFLTVS VLKNGIMTPI 250 260 270 280 290 300 ASVSHGMRDE EKSAIRKIME QHGQQTPSGE FTLEPSICAA VQYLTILQGT LREVSFIGFE 310 320 330 340 350 360 FQMDWTECTY AQVIRHSKPV HPKLQFTSLD KIIFEKNKKT KEDFIQYMIE VSDYLLPFLK 370 380 390 400 410 420 NRAVTVIRYP HGSRSESFFQ KNKPDYAPDF VQSFYDGSHE HIVCEDMSTL LWLCNQLALE 430 440 450 460 470 480 FHVPFQTIKS RRPAEIVIDL DPPSRDDFLM AVQAANELKR LLDSFGITSY PKLSGNKGIQ 490 500 510 520 530 540 LYIPLSPEAF TYEETRHFTQ LIAEYCTNAF PELFTTERLI KNRHGKLYLD YLQHAEGKTI 550 560 570 580 590 600 ICPYSTRGNE LGTVAAPLYW HEVQSSLTPA LFTIDTVIDR IKKQGCPFFD FYRNPQDEPL 610 SAILHQLKKK S

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete genome sequence of Bacillus subtilis BSn5, an endophytic bacterium of Amorphophallus konjac with antimicrobial activity to plant pathogen Erwinia carotovora subsp. carotovora." Deng Y., Zhu Y., Wang P., Zhu L., Zheng J., Li R., Ruan L., Peng D., Sun M. J. Bacteriol. 193:2070-2071(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: BSn5.
[2]	"Complete Genome Sequence of Bacillus Subtilis BSn5, a Strain of Plant-associated Bacterium with Antimicrobial Activity to Soil-borne Plant Pathogens." Deng Y., Sun M. Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: BSn5.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002468 Genomic DNA. Translation: ADV96353.1.
RefSeq	YP_004207380.1. NC_014976.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADV96353; ADV96353; BSn5_18735.
GeneID	10184477.
KEGG	bsn:BSn5_18735.
PATRIC	46874974. VBIBacSub180317_3824.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000008893.
KO	K01971.
Enzyme and pathway databases
BioCyc	BSUB936156:GHCY-3830-MONOMER.
Family and domain databases
InterPro	IPR012310. DNA_ligase_ATP-dep_cent. IPR014146. DNA_pol_LigD_ligase_dom. IPR014145. LigD_pol. IPR014143. NHEJ_ligase_prk. [Graphical view]
Pfam	PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
TIGRFAMs	TIGR02778. ligD_pol. 1 hit. TIGR02779. NHEJ_ligase_lig. 1 hit. TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITE	PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

E8VIV9_BACST

Accession

Primary (citable) accession number: E8VIV9

Entry history

Integrated into UniProtKB/TrEMBL:	April 5, 2011
Last sequence update:	April 5, 2011
Last modified:	May 1, 2013
This is version 15 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)