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E8VHR0 (E8VHR0_BACST) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Malate dehydrogenase EMBL ADV93786.1
EC=1.1.1.38 EMBL ADV93786.1
Gene names
Ordered Locus Names:BSn5_05790
OrganismBacillus subtilis (strain BSn5) [Complete proteome] [HAMAP]
Taxonomic identifier936156 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacilli › Bacillales › Bacillaceae › Bacillus ›

Protein attributes

Sequence length566 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Divalent metal cations. Prefers magnesium or manganese By similarity. PIRSR PIRSR000106-3

Sequence similarities

Belongs to the malic enzymes family. RuleBase RU003427

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1051Proton donor By similarity PIRSR PIRSR000106-1
Active site1781Proton acceptor By similarity PIRSR PIRSR000106-1
Metal binding2491Divalent metal cation By similarity PIRSR PIRSR000106-3
Metal binding2501Divalent metal cation By similarity PIRSR PIRSR000106-3
Metal binding2731Divalent metal cation By similarity PIRSR PIRSR000106-3

Sequences

Sequence LengthMass (Da)Tools
E8VHR0 [UniParc].

Last modified April 5, 2011. Version 1.
Checksum: 226CC95706727C80

FASTA56662,122
        10         20         30         40         50         60 
MKQFKVTNEG DIETTLRGLE VLSVPFLNKG VAFTEEERKE LGLKGFLPPK VLTIDDQAKR 

        70         80         90        100        110        120 
AYEQYSAQPD DLSKNVYLTA LHDRNETLFY RLLNDHLGEM LPIVYTPTVG TAIQRYSHEY 

       130        140        150        160        170        180 
RKPRGLYLSI DDPDGMKEAF KQYKDQSDTI DLIVATDAEG ILGIGDWGVG GIAISIGKLA 

       190        200        210        220        230        240 
VYTAAAGIDP SRVLAVVLDA GTNQESLLND PLYVGNQHSR VRGERYDQFI DDYVALARET 

       250        260        270        280        290        300 
FPNALLHWED FGAKNARSIL KRYKDKVCTF NDDIQGTGAV SLAAVLSCAK ASKVPLRDHR 

       310        320        330        340        350        360 
VVIFGAGTAG IGIAEQLREA LVREGLSEEE SYKRFWCIDR NGLLTDDMDQ LLDFQKPYAR 

       370        380        390        400        410        420 
SADEVKDYQR NGDGGGIDLL EVVRQAKPTI LIGTSTVSGA FTEEIVKEMA SHVKRPAILP 

       430        440        450        460        470        480 
MSNPTTLSEA KPEDLIEWTE GRALITTGSP FPPVEYNGVT YHIGQANNAL VFPGLGLGTI 

       490        500        510        520        530        540 
VTKSKLITDG MFEACARAIA GMVNVGVPGA PMLPKVEDLR TVSATVAVEV AKTAMKEGVA 

       550        560 
TEEPEDIIQA VQDAMWYPVY KPIRAI

« Hide

References

« Hide 'large scale' references
[1]"Complete genome sequence of Bacillus subtilis BSn5, an endophytic bacterium of Amorphophallus konjac with antimicrobial activity to plant pathogen Erwinia carotovora subsp. carotovora."
Deng Y., Zhu Y., Wang P., Zhu L., Zheng J., Li R., Ruan L., Peng D., Sun M.
J. Bacteriol. 193:2070-2071(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BSn5.
[2]"Complete Genome Sequence of Bacillus Subtilis BSn5, a Strain of Plant-associated Bacterium with Antimicrobial Activity to Soil-borne Plant Pathogens."
Deng Y., Sun M.
Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: BSn5.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002468 Genomic DNA. Translation: ADV93786.1.
RefSeqYP_004204813.1. NC_014976.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADV93786; ADV93786; BSn5_05790.
GeneID10181800.
KEGGbsn:BSn5_05790.
PATRIC46869377. VBIBacSub180317_1169.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000042487.
KOK00027.

Enzyme and pathway databases

BioCycBSUB936156:GHCY-1153-MONOMER.

Family and domain databases

Gene3D3.40.50.10380. 1 hit.
3.40.50.720. 1 hit.
InterProIPR015884. Malic_enzyme_CS.
IPR012301. Malic_N.
IPR012302. Malic_NAD-bd.
IPR001891. Malic_OxRdtase.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
PfamPF00390. malic. 1 hit.
PF03949. Malic_M. 1 hit.
[Graphical view]
PIRSFPIRSF000106. ME. 1 hit.
PRINTSPR00072. MALOXRDTASE.
SMARTSM00919. Malic_M. 1 hit.
[Graphical view]
PROSITEPS00331. MALIC_ENZYMES. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE8VHR0_BACST
AccessionPrimary (citable) accession number: E8VHR0
Entry history
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: May 1, 2013
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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