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Protein
Submitted name:

Alpha amylase catalytic region

Gene

AciPR4_2183

Organism
Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciTSAA401053:GHYY-2206-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha amylase catalytic regionImported
Gene namesi
Ordered Locus Names:AciPR4_2183Imported
OrganismiTerriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4)Imported
Taxonomic identifieri401053 [NCBI]
Taxonomic lineageiBacteriaAcidobacteriaAcidobacterialesAcidobacteriaceaeTerriglobus
ProteomesiUP000006844 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliE8V8K6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000031038.
KOiK01176.
OMAiTWITNEL.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

E8V8K6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAVMMQAFYW DAPQKENKRG EWWNYLNSKI PELSAAGIDT MWLPPISKAA
60 70 80 90 100
SPDSPGYDPY DYFDLGDFDQ KGAIKTLYGN SAELKQLLAS MREKHIGAIA
110 120 130 140 150
DMVINHNSGA DEEEVNPLDG QKRWTKFNPK SGRFPRDWNC FHPSRYEEAI
160 170 180 190 200
IEGEEFAGFP HLCHRNPSVY KHMFDYARMI IEELGFDGFR FDFVKGFGAW
210 220 230 240 250
MIGILAKYKY ERNGEEVRPF VVGEYWSGPE DIDNWLERVR AVTEGQIAAF
260 270 280 290 300
DFPLRYKLKD MCDTPNYDLR NLTDDGSVVS KRPFNAVTFV ENHDMGGNEI
310 320 330 340 350
VNDKILAYSF ILVNEGYPCI FWYDYYNLEL ARPLTPNGID ALIDAHHRYA
360 370 380 390 400
GGEACILHAD PDLYIMQRGG TEGQPGLIYV LNNLGDQWSG TSIKTKWHNQ
410 420 430 440
KFKPLAWSGH DEAHPDERTT NENGEAEFPA PPRGYCIYVP IFE
Length:443
Mass (Da):50,803
Last modified:April 5, 2011 - v1
Checksum:i5083A126905D600E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002467 Genomic DNA. Translation: ADV82985.1.
RefSeqiWP_013568718.1. NC_014963.1.
YP_004182979.1. NC_014963.1.

Genome annotation databases

EnsemblBacteriaiADV82985; ADV82985; AciPR4_2183.
KEGGitsa:AciPR4_2183.
PATRICi46830152. VBITerSaa54836_2274.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002467 Genomic DNA. Translation: ADV82985.1.
RefSeqiWP_013568718.1. NC_014963.1.
YP_004182979.1. NC_014963.1.

3D structure databases

ProteinModelPortaliE8V8K6.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADV82985; ADV82985; AciPR4_2183.
KEGGitsa:AciPR4_2183.
PATRICi46830152. VBITerSaa54836_2274.

Phylogenomic databases

HOGENOMiHOG000031038.
KOiK01176.
OMAiTWITNEL.

Enzyme and pathway databases

BioCyciTSAA401053:GHYY-2206-MONOMER.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of Terriglobus saanensis type strain SP1PR4(T), an Acidobacteria from tundra soil."
    Rawat S.R., Mannisto M.K., Starovoytov V., Goodwin L., Nolan M., Hauser L., Land M., Davenport K.W., Woyke T., Haggblom M.M.
    Stand. Genomic Sci. 7:59-69(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ATCC BAA-1853 / DSM 23119 / SP1PR4Imported.

Entry informationi

Entry nameiE8V8K6_TERSS
AccessioniPrimary (citable) accession number: E8V8K6
Entry historyi
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: May 27, 2015
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.