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Protein

DNA ligase

Gene

AciPR4_3963

Organism
Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + (deoxyribonucleotide)(n)-3'-hydroxyl + 5'-phospho-(deoxyribonucleotide)(m) = (deoxyribonucleotide)(n+m) + AMP + diphosphate.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigaseUniRule annotationImported
Biological processDNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation
LigandATP-bindingUniRule annotation, Nucleotide-binding

Enzyme and pathway databases

BioCyciTSAA401053:G1GQ1-3964-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:AciPR4_3963Imported
OrganismiTerriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4)Imported
Taxonomic identifieri401053 [NCBI]
Taxonomic lineageiBacteriaAcidobacteriaAcidobacterialesAcidobacteriaceaeTerriglobus
Proteomesi
  • UP000006844 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi401053.AciPR4_3963

Structurei

3D structure databases

ProteinModelPortaliE8V3M5
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini369 – 527DNA_LIGASE_A3InterPro annotationAdd BLAST159

Sequence similaritiesi

Belongs to the ATP-dependent DNA ligase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4107T0X Bacteria
COG1793 LUCA
HOGENOMiHOG000036008
KOiK10747
OMAiWIKYKRD
OrthoDBiPOG091H09SJ

Family and domain databases

Gene3Di1.10.3260.10, 1 hit
InterProiView protein in InterPro
IPR000977 DNA_ligase_ATP-dep
IPR012309 DNA_ligase_ATP-dep_C
IPR012310 DNA_ligase_ATP-dep_cent
IPR016059 DNA_ligase_ATP-dep_CS
IPR012308 DNA_ligase_ATP-dep_N
IPR036599 DNA_ligase_N_sf
IPR012340 NA-bd_OB-fold
PfamiView protein in Pfam
PF04679 DNA_ligase_A_C, 1 hit
PF01068 DNA_ligase_A_M, 1 hit
PF04675 DNA_ligase_A_N, 1 hit
SUPFAMiSSF117018 SSF117018, 1 hit
SSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR00574 dnl1, 1 hit
PROSITEiView protein in PROSITE
PS00697 DNA_LIGASE_A1, 1 hit
PS00333 DNA_LIGASE_A2, 1 hit
PS50160 DNA_LIGASE_A3, 1 hit

Sequencei

Sequence statusi: Complete.

E8V3M5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALFLQLAEL ADVLAATSSR LKKRAAIAEG ITAVHAQSPE EAGLFALYLA
60 70 80 90 100
GQTFPEADPR KLNAGGAVLS RIIASISHAA DTAMTEAYRR HGDLGAATHD
110 120 130 140 150
LFLDAGHNPP PTLTFTDLHD AFAQASIART TVIRQIVLTD LLTRAIPVEA
160 170 180 190 200
KYLIKLMLGD MRIGVKQSLV EEAIAVAAEA SLSDVRNAVM LQADLACATE
210 220 230 240 250
MAFAKTLREA RMRLFHPLGF MLASPVETPE EAVERFAKIP VESDASTPPP
260 270 280 290 300
THVEPDPPSV SEDAYTVTAQ EEISPEAIHI HAQIEDKYDG MRVQLHCGDP
310 320 330 340 350
AQPGRVALYS RNREDVTESY PEIAEAFAHA ESGAMILDGE LLAWDVQQER
360 370 380 390 400
ALPFAVLSPR IGRKRVSNEV RTATPVVFMA FDVLYASDSL LLDLPLRERR
410 420 430 440 450
NRLEAIAERL LAVTHSPLAL PATADTGLFA HDNGAAQTGV QRLLLSPISL
460 470 480 490 500
AYSAEDLDRA YNAARERGNE GVMIKAADSI YQPGRRGISW VKLKRQLGTL
510 520 530 540 550
DVVITGAEYG HGKRSQFLSD YTFAIRAPEG DLLNVGKAYS GVTDAEIVKL
560 570 580 590 600
TAWLKDHTLE DQGHFRTVEP GIVLEVAFNN VMRSSRHASG FALRFPRILR
610 620 630
IRTDKPLEEI DTLERVEEIY QSQPDKPAEA
Length:630
Mass (Da):68,879
Last modified:April 5, 2011 - v1
Checksum:i6931CDA56D387B40
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002467 Genomic DNA Translation: ADV84712.1
RefSeqiWP_013570442.1, NC_014963.1

Genome annotation databases

EnsemblBacteriaiADV84712; ADV84712; AciPR4_3963
KEGGitsa:AciPR4_3963

Similar proteinsi

Entry informationi

Entry nameiE8V3M5_TERSS
AccessioniPrimary (citable) accession number: E8V3M5
Entry historyiIntegrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: March 28, 2018
This is version 39 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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