E8V3A7 (E8V3A7_TERSS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA ligase D EMBL ADV82464.1

Gene names

Ordered Locus Names:

AciPR4_1657

Organism

Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) [Complete proteome] [HAMAP] EMBL ADV82464.1

Taxonomic identifier

401053 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Fibrobacteres/Acidobacteria group › Acidobacteria › Acidobacteriia › Acidobacteriales › Acidobacteriaceae › Terriglobus › Terriglobus saanensis

Protein attributes

Sequence length	957 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ADV82464.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E8V3A7 [UniParc]. Last modified April 5, 2011. Version 1. Checksum: 4D89F25806BE80B6	FASTA	957	105,736
	10 20 30 40 50 60 MKMATAKKAP AKKSATKKTA TEKAAKKVSA KAAVKSASPK TAVKKAAAKK AVPYADAGDQ 70 80 90 100 110 120 IDTQLARYRS MRNFGVTAEP SGGSKSSKLK SDAFPFVIQK HAASHLHYDF RLGWNGVLKS 130 140 150 160 170 180 WAVAKGPSYF TGDRRLAVQV EDHPMEYGGF EGIIPKGQYG GGTVMVWDQG TWEPHVDVDE 190 200 210 220 230 240 GLSKGTLKFA MNGTKMKGNW TLVRMNNMSG NKPNWLLIKE HDEFERTKDD PCVTAEEPNS 250 260 270 280 290 300 VVTGRSLEQI AAAETHVWQS NRTKNAGQAW FRNDDTQVGS DQTEAPETEA VVKAAPKEDK 310 320 330 340 350 360 KKASEKVIDL KAKLAPLPKE KLPDFIAPQL ASHADTPPEH GDWLHELKLD GYRIQARKQG 370 380 390 400 410 420 DKIQLLTRTG LDWTHRMKPV AEALRSLKAK DALVDGEVVV LDESGISSFA KLQASFEQGE 430 440 450 460 470 480 KHPMTYFVFD LLHLDAADTR KLPLRERKSL LTAILPSSTE IQMSEHLHLD GGSVFQHACE 490 500 510 520 530 540 LHAEGIISKR ADAPYTPGRN ASWVKSKCVR EQEFVIGGFT LPSNDTYGIG SLLLGYYRDG 550 560 570 580 590 600 KLIYAGRTGT GFTQKIHRML RDKLEGLRTK SVTFDQIPAV AKRDANWVKP ELLAQVRFAT 610 620 630 640 650 660 WTADDLVRQA SYLGLREDKL AADVRREEAT VAPKPRSARV SVKVPSASIA AKVAPAKAKK 670 680 690 700 710 720 AKSEDAPRTT VPVRLTHPEK ILDETTGITK LQLAEYYWAI AEHMLPHIED RPLSLVRCPE 730 740 750 760 770 780 GSGKPCFFQK HTNHMLPPGI GSVMVPNKKT GEPESYITLN TAEALAGLAQ MGVLEVHPWG 790 800 810 820 830 840 SKNSDLEHPD RIIIDLDPDE AITWKQLSDS AESVRNGLET IGLKSFLKTT GGKGLHVVIP 850 860 870 880 890 900 MTPNHDWTQV KAWSHAFAQA FEKEQPDLYL TKMTKSARKG KIYIDYLRNE RGATAVAPFS 910 920 930 940 950 PRARPGATVS VPLAWKELAS PKHPAFSIQD FENWKARLKS DPWKNMQGIK QTLPGLS

References

[1]

"Complete sequence of Terriglobus saanensis SP1PR4." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Zeytun A., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Mikhailova N., Pagani I., Rawat S.R., Mannisto M.K., Haggblom M.M., Woyke T. Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-1853 / DSM 23119 / SP1PR4.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002467 Genomic DNA. Translation: ADV82464.1.
RefSeq	YP_004182458.1. NC_014963.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADV82464; ADV82464; AciPR4_1657.
GeneID	10159565.
KEGG	tsa:AciPR4_1657.
PATRIC	46829060. VBITerSaa54836_1733.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000222509.
KO	K01971.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR014146. DNA_pol_LigD_ligase_dom. IPR014144. LigD_PE_domain. IPR014145. LigD_pol. IPR012340. NA-bd_OB-fold. IPR014143. NHEJ_ligase_prk. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. PF13298. LigD_N. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR02777. LigD_PE_dom. 1 hit. TIGR02778. ligD_pol. 1 hit. TIGR02779. NHEJ_ligase_lig. 1 hit. TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITE	PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

E8V3A7_TERSS

Accession

Primary (citable) accession number: E8V3A7

Entry history

Integrated into UniProtKB/TrEMBL:	April 5, 2011
Last sequence update:	April 5, 2011
Last modified:	May 1, 2013
This is version 15 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)