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E8V3A7 (E8V3A7_TERSS) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length957 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ADV82464.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
E8V3A7 [UniParc].

Last modified April 5, 2011. Version 1.
Checksum: 4D89F25806BE80B6

FASTA957105,736
        10         20         30         40         50         60 
MKMATAKKAP AKKSATKKTA TEKAAKKVSA KAAVKSASPK TAVKKAAAKK AVPYADAGDQ 

        70         80         90        100        110        120 
IDTQLARYRS MRNFGVTAEP SGGSKSSKLK SDAFPFVIQK HAASHLHYDF RLGWNGVLKS 

       130        140        150        160        170        180 
WAVAKGPSYF TGDRRLAVQV EDHPMEYGGF EGIIPKGQYG GGTVMVWDQG TWEPHVDVDE 

       190        200        210        220        230        240 
GLSKGTLKFA MNGTKMKGNW TLVRMNNMSG NKPNWLLIKE HDEFERTKDD PCVTAEEPNS 

       250        260        270        280        290        300 
VVTGRSLEQI AAAETHVWQS NRTKNAGQAW FRNDDTQVGS DQTEAPETEA VVKAAPKEDK 

       310        320        330        340        350        360 
KKASEKVIDL KAKLAPLPKE KLPDFIAPQL ASHADTPPEH GDWLHELKLD GYRIQARKQG 

       370        380        390        400        410        420 
DKIQLLTRTG LDWTHRMKPV AEALRSLKAK DALVDGEVVV LDESGISSFA KLQASFEQGE 

       430        440        450        460        470        480 
KHPMTYFVFD LLHLDAADTR KLPLRERKSL LTAILPSSTE IQMSEHLHLD GGSVFQHACE 

       490        500        510        520        530        540 
LHAEGIISKR ADAPYTPGRN ASWVKSKCVR EQEFVIGGFT LPSNDTYGIG SLLLGYYRDG 

       550        560        570        580        590        600 
KLIYAGRTGT GFTQKIHRML RDKLEGLRTK SVTFDQIPAV AKRDANWVKP ELLAQVRFAT 

       610        620        630        640        650        660 
WTADDLVRQA SYLGLREDKL AADVRREEAT VAPKPRSARV SVKVPSASIA AKVAPAKAKK 

       670        680        690        700        710        720 
AKSEDAPRTT VPVRLTHPEK ILDETTGITK LQLAEYYWAI AEHMLPHIED RPLSLVRCPE 

       730        740        750        760        770        780 
GSGKPCFFQK HTNHMLPPGI GSVMVPNKKT GEPESYITLN TAEALAGLAQ MGVLEVHPWG 

       790        800        810        820        830        840 
SKNSDLEHPD RIIIDLDPDE AITWKQLSDS AESVRNGLET IGLKSFLKTT GGKGLHVVIP 

       850        860        870        880        890        900 
MTPNHDWTQV KAWSHAFAQA FEKEQPDLYL TKMTKSARKG KIYIDYLRNE RGATAVAPFS 

       910        920        930        940        950 
PRARPGATVS VPLAWKELAS PKHPAFSIQD FENWKARLKS DPWKNMQGIK QTLPGLS 

« Hide

References

[1]"Complete genome sequence of Terriglobus saanensis type strain SP1PR4(T), an Acidobacteria from tundra soil."
Rawat S.R., Mannisto M.K., Starovoytov V., Goodwin L., Nolan M., Hauser L., Land M., Davenport K.W., Woyke T., Haggblom M.M.
Stand. Genomic Sci. 7:59-69(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: ATCC BAA-1853 / DSM 23119 / SP1PR4.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002467 Genomic DNA. Translation: ADV82464.1.
RefSeqYP_004182458.1. NC_014963.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADV82464; ADV82464; AciPR4_1657.
GeneID10159565.
KEGGtsa:AciPR4_1657.
PATRIC46829060. VBITerSaa54836_1733.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000222509.
KOK01971.

Enzyme and pathway databases

BioCycTSAA401053:GHYY-1675-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE8V3A7_TERSS
AccessionPrimary (citable) accession number: E8V3A7
Entry history
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: April 16, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)