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E8UUX3 (E8UUX3_THEBF) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length230 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release By similarity. HAMAP-Rule MF_01318

Protein L1 is also a translational repressor protein, it controls the translation of the L11 operon by binding to its mRNA By similarity. HAMAP-Rule MF_01318

Subunit structure

Part of the 50S ribosomal subunit By similarity. HAMAP-Rule MF_01318

Sequence similarities

Belongs to the ribosomal protein L1P family. HAMAP-Rule MF_01318

Sequences

Sequence LengthMass (Da)Tools
E8UUX3 [UniParc].

Last modified April 5, 2011. Version 1.
Checksum: AC36EA5538912ECC

FASTA23025,014
        10         20         30         40         50         60 
MKRGKKYLES LKLYDKTQQY SSDEAIDIVL KTAKANFDET IDLAVRLGVD PRHADQQVRG 

        70         80         90        100        110        120 
TVVLPHGTGK SVKVLVFAKG EKAKEAEAAG ADYVGAEELV AKIQNENWFD YDVVVATPDM 

       130        140        150        160        170        180 
MGAVGRLGKI LGPKGLMPNP KSGTVTFDLE KAIKEIKAGK IEYRVDKAGI IHVPIGKKSF 

       190        200        210        220        230 
GKEKLLENFR AVMDAIIKSK PAAAKGQYIK SLVLSSTMGP GVKVNPLKIF 

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References

[1]"Complete sequence of Thermoanaerobacter brockii finnii Ako-1."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Chertkov O., Munk C., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Mikhailova N., Pagani I., Hemme C.L., Woyke T.
Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 43586 / DSM 3389 / AKO-1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002466 Genomic DNA. Translation: ADV78988.1.
RefSeqYP_004185371.1. NC_014964.1.

3D structure databases

ProteinModelPortalE8UUX3.
SMRE8UUX3. Positions 5-227.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADV78988; ADV78988; Thebr_0373.
GeneID10162607.
KEGGtbo:Thebr_0373.
PATRIC47038637. VBITheBro57020_0392.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000207015.
KOK02863.

Enzyme and pathway databases

BioCycTBRO509193:GHWP-381-MONOMER.

Family and domain databases

Gene3D3.30.190.20. 2 hits.
3.40.50.790. 1 hit.
HAMAPMF_01318_B. Ribosomal_L1_B.
InterProIPR005878. Ribosom_L1_bac-type.
IPR002143. Ribosomal_L1.
IPR023674. Ribosomal_L1-like.
IPR028364. Ribosomal_L1/biogenesis.
IPR016094. Ribosomal_L1_2-a/b-sand.
IPR016095. Ribosomal_L1_3-a/b-sand.
IPR023673. Ribosomal_L1_CS.
[Graphical view]
PfamPF00687. Ribosomal_L1. 1 hit.
[Graphical view]
PIRSFPIRSF002155. Ribosomal_L1. 1 hit.
SUPFAMSSF56808. SSF56808. 1 hit.
TIGRFAMsTIGR01169. rplA_bact. 1 hit.
PROSITEPS01199. RIBOSOMAL_L1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE8UUX3_THEBF
AccessionPrimary (citable) accession number: E8UUX3
Entry history
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: February 19, 2014
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)