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E8UUX3

- E8UUX3_THEBF

UniProt

E8UUX3 - E8UUX3_THEBF

Protein

50S ribosomal protein L1

Gene

rplA

Organism
Thermoanaerobacter brockii subsp. finnii (strain ATCC 43586 / DSM 3389 / AKO-1) (Thermoanaerobacter finnii)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 22 (01 Oct 2014)
      Sequence version 1 (05 Apr 2011)
      Previous versions | rss
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    Functioni

    Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.UniRule annotation
    Protein L1 is also a translational repressor protein, it controls the translation of the L11 operon by binding to its mRNA.UniRule annotation

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-HAMAP
    2. structural constituent of ribosome Source: InterPro
    3. tRNA binding Source: UniProtKB-KW

    GO - Biological processi

    1. regulation of translation Source: UniProtKB-KW
    2. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    RepressorUniRule annotation, Ribonucleoprotein, Ribosomal proteinUniRule annotationImported

    Keywords - Biological processi

    Translation regulationUniRule annotation

    Keywords - Ligandi

    RNA-binding, rRNA-bindingUniRule annotation, tRNA-bindingUniRule annotation

    Enzyme and pathway databases

    BioCyciTBRO509193:GHWP-381-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L1UniRule annotation
    Gene namesi
    Name:rplAUniRule annotation
    Ordered Locus Names:Thebr_0373Imported
    OrganismiThermoanaerobacter brockii subsp. finnii (strain ATCC 43586 / DSM 3389 / AKO-1) (Thermoanaerobacter finnii)Imported
    Taxonomic identifieri509193 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesClostridiaThermoanaerobacteralesThermoanaerobacteraceaeThermoanaerobacter
    ProteomesiUP000002062: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. large ribosomal subunit Source: InterPro

    Interactioni

    Subunit structurei

    Part of the 50S ribosomal subunit.UniRule annotation

    Structurei

    3D structure databases

    ProteinModelPortaliE8UUX3.
    SMRiE8UUX3. Positions 5-227.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L1P family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000207015.
    KOiK02863.

    Family and domain databases

    Gene3Di3.30.190.20. 2 hits.
    3.40.50.790. 1 hit.
    HAMAPiMF_01318_B. Ribosomal_L1_B.
    InterProiIPR005878. Ribosom_L1_bac-type.
    IPR002143. Ribosomal_L1.
    IPR023674. Ribosomal_L1-like.
    IPR028364. Ribosomal_L1/biogenesis.
    IPR016094. Ribosomal_L1_2-a/b-sand.
    IPR016095. Ribosomal_L1_3-a/b-sand.
    IPR023673. Ribosomal_L1_CS.
    [Graphical view]
    PfamiPF00687. Ribosomal_L1. 1 hit.
    [Graphical view]
    PIRSFiPIRSF002155. Ribosomal_L1. 1 hit.
    SUPFAMiSSF56808. SSF56808. 1 hit.
    TIGRFAMsiTIGR01169. rplA_bact. 1 hit.
    PROSITEiPS01199. RIBOSOMAL_L1. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E8UUX3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKRGKKYLES LKLYDKTQQY SSDEAIDIVL KTAKANFDET IDLAVRLGVD    50
    PRHADQQVRG TVVLPHGTGK SVKVLVFAKG EKAKEAEAAG ADYVGAEELV 100
    AKIQNENWFD YDVVVATPDM MGAVGRLGKI LGPKGLMPNP KSGTVTFDLE 150
    KAIKEIKAGK IEYRVDKAGI IHVPIGKKSF GKEKLLENFR AVMDAIIKSK 200
    PAAAKGQYIK SLVLSSTMGP GVKVNPLKIF 230
    Length:230
    Mass (Da):25,014
    Last modified:April 5, 2011 - v1
    Checksum:iAC36EA5538912ECC
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002466 Genomic DNA. Translation: ADV78988.1.
    RefSeqiYP_004185371.1. NC_014964.1.

    Genome annotation databases

    EnsemblBacteriaiADV78988; ADV78988; Thebr_0373.
    GeneIDi10162607.
    KEGGitbo:Thebr_0373.
    PATRICi47038637. VBITheBro57020_0392.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002466 Genomic DNA. Translation: ADV78988.1 .
    RefSeqi YP_004185371.1. NC_014964.1.

    3D structure databases

    ProteinModelPortali E8UUX3.
    SMRi E8UUX3. Positions 5-227.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADV78988 ; ADV78988 ; Thebr_0373 .
    GeneIDi 10162607.
    KEGGi tbo:Thebr_0373.
    PATRICi 47038637. VBITheBro57020_0392.

    Phylogenomic databases

    HOGENOMi HOG000207015.
    KOi K02863.

    Enzyme and pathway databases

    BioCyci TBRO509193:GHWP-381-MONOMER.

    Family and domain databases

    Gene3Di 3.30.190.20. 2 hits.
    3.40.50.790. 1 hit.
    HAMAPi MF_01318_B. Ribosomal_L1_B.
    InterProi IPR005878. Ribosom_L1_bac-type.
    IPR002143. Ribosomal_L1.
    IPR023674. Ribosomal_L1-like.
    IPR028364. Ribosomal_L1/biogenesis.
    IPR016094. Ribosomal_L1_2-a/b-sand.
    IPR016095. Ribosomal_L1_3-a/b-sand.
    IPR023673. Ribosomal_L1_CS.
    [Graphical view ]
    Pfami PF00687. Ribosomal_L1. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF002155. Ribosomal_L1. 1 hit.
    SUPFAMi SSF56808. SSF56808. 1 hit.
    TIGRFAMsi TIGR01169. rplA_bact. 1 hit.
    PROSITEi PS01199. RIBOSOMAL_L1. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Thermoanaerobacter brockii finnii Ako-1."
      US DOE Joint Genome Institute
      Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Chertkov O., Munk C., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Mikhailova N., Pagani I., Hemme C.L., Woyke T.
      Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 43586 / DSM 3389 / AKO-1Imported.

    Entry informationi

    Entry nameiE8UUX3_THEBF
    AccessioniPrimary (citable) accession number: E8UUX3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 5, 2011
    Last sequence update: April 5, 2011
    Last modified: October 1, 2014
    This is version 22 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3