E8TXN5 (E8TXN5_ALIDB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Periplasmic copper-binding protein EMBL ADV00803.1

Gene names

Ordered Locus Names:

Alide_3079 EMBL ADV00803.1

Organism

Alicycliphilus denitrificans (strain JCM 14587 / BC) [Complete proteome] [HAMAP] EMBL ADV00803.1

Taxonomic identifier

596153 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Comamonadaceae › Alicycliphilus › Alicycliphilus denitrificans

Protein attributes

Sequence length	422 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ADV00803.1
Technical term	Complete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 22	22	Potential EMBL ADV00803.1
	Chain	23 – 422	400	Potential		PRO_5000698900

Sequences

	Sequence		Length	Mass (Da)
	E8TXN5 [UniParc]. Last modified April 5, 2011. Version 1. Checksum: 369A0F880E75F4E3	FASTA	422	47,297
	10 20 30 40 50 60 MTSLSHLGAA LALCIAGACQ AATLSVRPGD DLAAAVAKAR PGDVIEVARG QYRANLLIDK 70 80 90 100 110 120 PLTLRGLDRP TISGGNQGDT IRVTAPDVVI EGLIVRDSGD DLKDQNAGIY LYPGAHRAIV 130 140 150 160 170 180 RRCDLTYNLF GLWIEKADDV LIEHNTITGK REYASPQRGN GVQLYNTKGA KILGNDISFV 190 200 210 220 230 240 RDALYVDVSH HAVFRGNRLH HSRYGTHYMN SYYNLWEDND TYYNRGGLAL MEVRNQEVRG 250 260 270 280 290 300 NRAWGNSDHG IMLRTLQDSV IEGNVVAGNN RGFFIYDVEY IKLNDNLVVD NTVGVHLSAG 310 320 330 340 350 360 STRNEVEGND FIANREQVRY VGARDERWGT RRGNYWSNYL GWDRNGDGMG DVQYEANDMV 370 380 390 400 410 420 DRLTWRHPSI KLLLASPAVQ ALRLVGQQFP VLRVPSVVDP HPRMRPYHQD WSQWRGKHFP GQ

References

[1]

"Complete sequence of chromosome of Alicycliphilus denitrificans BC." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Daligault H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Mikhailova N., Oosterkamp M.J., Veuskens T., Weelink S.A. , Plugge C.M., Stams A.J.M., Woyke T. Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: JCM 14587 / BC.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002449 Genomic DNA. Translation: ADV00803.1.
RefSeq	YP_004127690.1. NC_014910.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADV00803; ADV00803; Alide_3079.
GeneID	10105150.
KEGG	adn:Alide_3079.
PATRIC	45145053. VBIAliDen149934_3194.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000286725.
KO	K07218.
Enzyme and pathway databases
BioCyc	ADEN596153:GHGY-3219-MONOMER.
Family and domain databases
Gene3D	2.160.20.10. 1 hit.
InterPro	IPR006633. Carb-bd_sugar_hydrolysis-dom. IPR026464. NosD_copper_fam. IPR007742. NosD_dom. IPR022441. Para_beta_helix_rpt-2. IPR006626. PbH1. IPR012334. Pectin_lyas_fold. IPR011050. Pectin_lyase_fold/virulence. [Graphical view]
Pfam	PF05048. NosD. 1 hit. [Graphical view]
SMART	SM00722. CASH. 2 hits. SM00710. PbH1. 9 hits. [Graphical view]
SUPFAM	SSF51126. Pectin_lyas_like. 1 hit.
TIGRFAMs	TIGR04247. NosD_copper_fam. 1 hit. TIGR03804. para_beta_helix. 1 hit.
ProtoNet	Search...

Entry information

Entry name

E8TXN5_ALIDB

Accession

Primary (citable) accession number: E8TXN5

Entry history

Integrated into UniProtKB/TrEMBL:	April 5, 2011
Last sequence update:	April 5, 2011
Last modified:	May 1, 2013
This is version 16 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)