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Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC)
Status
Unreviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotation

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotation

Cofactori

Mg2+UniRule annotationSAAS annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei158 – 1581UniRule annotation
Active sitei600 – 6001UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotation

Keywords - Biological processi

Carbon dioxide fixationUniRule annotationSAAS annotation

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotation, PyruvateImported

Enzyme and pathway databases

BioCyciADEN596153:GHGY-2848-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylaseUniRule annotationSAAS annotation (EC:4.1.1.31UniRule annotationSAAS annotation)
Short name:
PEPCUniRule annotation
Short name:
PEPCaseUniRule annotation
Gene namesi
Name:ppcUniRule annotation
Ordered Locus Names:Alide_2810Imported
OrganismiAlicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC)Imported
Taxonomic identifieri596153 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeAlicycliphilus
ProteomesiUP000006626 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Subunit structurei

Homotetramer.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000238647.
KOiK01595.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR003661. EnvZ-like_dim/P.
IPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SMARTiSM00388. HisKA. 1 hit.
[Graphical view]
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E8TUD6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTAPARKTDA AASPARRTDK DLPLIQDIRL LGRILGDVIR EQEGVAAYEV
60 70 80 90 100
VEQVRKLSVA FRRDADHEAD RMLKKLLKSL TGDQTVSVIR AFTYFSHLAN
110 120 130 140 150
LAEDRHHIRR RAVHERAGSS QEGSIEVALA RLRWAGIAPR TVAQTLATSY
160 170 180 190 200
VAPVLTAHPT EVQRKSILDA EREIAQLLAR RDDILARAQL YNSAKDTVSP
210 220 230 240 250
RELAANEAQL RARVAQLWQT RLLRYSKLTV ADEIENALSY YESTFLQEIP
260 270 280 290 300
RIYADLEREL GGNQSVASFL RMGQWIGGDR DGNPNVSAAT LALALRRQSD
310 320 330 340 350
VALRHYLTEV HHLGRELSLS ANLVQVSPEM QELAVRSPDT SEHRQDEPYR
360 370 380 390 400
RVLAGVYARL AATLKDLSGG DAARHAVAPQ NAYVSAEEFL ADLRVIEASL
410 420 430 440 450
QSHRGAALTA ERLRPLIRAV EVFGFHLATV DLRQSSDQHE HVVAELLATA
460 470 480 490 500
RVQADYAALP EPERRALLLR LLCDARPLRV VGAQYSELAM NELAIFETAR
510 520 530 540 550
LMRERYGKDA IRHYIISHTE TVSDLLEVLL LQKEVGLMRG TLDAGACADL
560 570 580 590 600
IVVPLFETIE DLRNAAPIMR EFYAIPGIAQ LVRASGAEQD IMLGYSDSNK
610 620 630 640 650
DGGIFTSNWE LYRAEIALVA LFDELNAAKG GAPIRLRMFH GRGGTVGRGG
660 670 680 690 700
GPSYQAILAQ PPGTVRGQIR LTEQGEVIAS KYANPEIGRR NLETLVAATL
710 720 730 740 750
EATLLQPTKP ATKAFLEAAE QLSRDSMAAY RALVYETPGF VDYFFGATPI
760 770 780 790 800
REIAQLNIGS RPASRKPSQR IEDLRAIPWG FSWGQCRLTL PGWFGFGAAV
810 820 830 840 850
QAFVEAPGQD PKSRLALLQK MYRQWPFFRT LLSNMDMVLA KSDLALASRY
860 870 880 890 900
SELVADARLR KKVFSAIEQE WQRTSEALTR ITGEKQRLAA NTALARSMRH
910 920 930 940
RFPYIDPLHH LQVELVRRWR AGQGDERVQT GIHICINGIA AGLRNTG
Length:947
Mass (Da):105,318
Last modified:April 5, 2011 - v1
Checksum:i156703720C442137
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002449 Genomic DNA. Translation: ADV00541.1.
RefSeqiWP_013519628.1. NC_014910.1.
YP_004127428.1. NC_014910.1.

Genome annotation databases

EnsemblBacteriaiADV00541; ADV00541; Alide_2810.
KEGGiadn:Alide_2810.
PATRICi45144464. VBIAliDen149934_2912.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002449 Genomic DNA. Translation: ADV00541.1.
RefSeqiWP_013519628.1. NC_014910.1.
YP_004127428.1. NC_014910.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADV00541; ADV00541; Alide_2810.
KEGGiadn:Alide_2810.
PATRICi45144464. VBIAliDen149934_2912.

Phylogenomic databases

HOGENOMiHOG000238647.
KOiK01595.

Enzyme and pathway databases

BioCyciADEN596153:GHGY-2848-MONOMER.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR003661. EnvZ-like_dim/P.
IPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SMARTiSM00388. HisKA. 1 hit.
[Graphical view]
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome of Alicycliphilus denitrificans BC."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Daligault H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Mikhailova N., Oosterkamp M.J., Veuskens T., Weelink S.A.
    , Plugge C.M., Stams A.J.M., Woyke T.
    Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JCM 14587 / BCImported.

Entry informationi

Entry nameiE8TUD6_ALIDB
AccessioniPrimary (citable) accession number: E8TUD6
Entry historyi
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: June 24, 2015
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.