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E8TFS2 (E8TFS2_MESCW) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length837 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ADV09952.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

DNA primase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
E8TFS2 [UniParc].

Last modified April 5, 2011. Version 1.
Checksum: B1C76C12ED036C2E

FASTA83792,161
        10         20         30         40         50         60 
MASLEQYHSK RDFKKTAEPA GKVARTKQGE AGGIFVIHKH AATRLHYDLR LEHDGVLWSW 

        70         80         90        100        110        120 
AVTRGPSLDP HEKRLAVHVE DHPIDYAPFE GTIPKGEYGG GSVIVWDEGT WIPEIDPAKA 

       130        140        150        160        170        180 
MKKGHISFEL RGHKLHGAWH LVRLKPRAGE KRDNWLLIKS DDAAARPGED ILKEAPESVK 

       190        200        210        220        230        240 
SGLTIEEVGE GKTAKGEKPK VWHSNKPAAV KTKAGKRLDF IEPQLATLER DAPPGKDWLH 

       250        260        270        280        290        300 
EVKFDGYRMQ AQIAGTDVRL LTRTGLDWTK KFGGEIVAEL AGLKCSDAIL DGEVVVLADS 

       310        320        330        340        350        360 
GVSSFALLQQ DLSAKRTNRF IYYVFDLMRL DGRDLRREPL VERKQALQEL LGEHSDNAAV 

       370        380        390        400        410        420 
RFSDHFAEPG KIMLEHACRM GLEGVVSKRA DAPYRSGRGP TWVKSKCTAR QEFVIGGYLP 

       430        440        450        460        470        480 
SDKTGRGLRS ILVGFHEGGK LHYAGRVGTG FSGKGANELK AKLDALTAKS SPFSTAVPKG 

       490        500        510        520        530        540 
KGLVWVKPEL VGEVEFRSWT SDRIIRHASF QGLREDKPAE EVVQEKPKAA TGMPSTGKST 

       550        560        570        580        590        600 
AKPASGGKAA GSMTTTVKLS HPDKLLWPDE NISKQGLLDH YAQVWPRMEQ FVVNRPLSLV 

       610        620        630        640        650        660 
RAPDGVGGQR FFQKHASAGM SDKIARMKDP TDGEEILFIR DFDGVAALVQ YGVVEIHIWG 

       670        680        690        700        710        720 
CTIDEIEKPD QIIFDLDPDE GVDVKAVREA ALDIRGKLDE LSLPNFVKTS GGKGYHVLVP 

       730        740        750        760        770        780 
LKPAADWDAV KGFAHDFARA LEQGAPDRYT ATLSKKARTG KIFVDYLRNG RGSTTVAPYS 

       790        800        810        820        830 
SRAKKGATVS MPVTWPEIEA GLPPNAFPIG DKTTLKQLAK ADPWREFFKQ GKTLKRG

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References

[1]"Complete sequence of chromosome of Mesorhizobium ciceri bv. biserrulae WSM1271."
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Nandasena K., Reeve W.G., Howieson J.G., O'Hara G., Tiwari R.P., Woyke T.
Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: HAMBI 2942 / LMG 23838 / WSM1271.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002447 Genomic DNA. Translation: ADV09952.1.
RefSeqYP_004140002.1. NC_014923.1.

3D structure databases

ProteinModelPortalE8TFS2.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADV09952; ADV09952; Mesci_0783.
GeneID10116228.
KEGGmci:Mesci_0783.
PATRIC45251417. VBIMesCic160642_1211.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000222509.
KOK01971.
OMAWHLVRSG.

Enzyme and pathway databases

BioCycMCIC765698:GHQ5-789-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE8TFS2_MESCW
AccessionPrimary (citable) accession number: E8TFS2
Entry history
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: May 1, 2013
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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