Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

E8TEF1

- E8TEF1_MESCW

UniProt

E8TEF1 - E8TEF1_MESCW

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Mesci_5469

Organism
Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 23 (01 Oct 2014)
      Sequence version 1 (05 Apr 2011)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciMCIC765698:GHQ5-5531-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Mesci_5469Imported
    OrganismiMesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271)Imported
    Taxonomic identifieri765698 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesPhyllobacteriaceaeMesorhizobium
    ProteomesiUP000007471: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliE8TEF1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000222508.
    KOiK01971.
    OMAiPFPPMEA.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    E8TEF1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MHEPTNAFPL PLDTSPMEAR LADAIPRDGN RWQYEPKWDG FRCLAFKSDD    50
    TVDLRAKSGK PLGRYFPEIT EILRDLKRGH FVIDGEIVIE VDGELSFEAL 100
    QMRLHPAQSR IRKLSSQTPA SLILFDMLAR PGGEVITGKP LVERRRAIED 150
    FVTSSNSPDL RLSKCTYDAA TAARWLNGAG HASTDGIVAK VLDEHYLCGE 200
    RAMVKVKPRR TADCVVGGFR YLAGSREVGS LLLGLYNDDG KLDHVGFTST 250
    IARTDRGALT RRLEGLRSEP GFTGKAPGGP SRWSTERSGQ WEPLEPELVV 300
    EVRFDHVTGN RFRHGTKLLR WRPDKAPRQC TFEQIE 336
    Length:336
    Mass (Da):37,654
    Last modified:April 5, 2011 - v1
    Checksum:iBF7104515EC8D7F2
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002447 Genomic DNA. Translation: ADV14566.1.
    RefSeqiWP_013533217.1. NC_014923.1.
    YP_004144616.1. NC_014923.1.

    Genome annotation databases

    EnsemblBacteriaiADV14566; ADV14566; Mesci_5469.
    GeneIDi10120969.
    KEGGimci:Mesci_5469.
    PATRICi45261192. VBIMesCic160642_6005.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002447 Genomic DNA. Translation: ADV14566.1 .
    RefSeqi WP_013533217.1. NC_014923.1.
    YP_004144616.1. NC_014923.1.

    3D structure databases

    ProteinModelPortali E8TEF1.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADV14566 ; ADV14566 ; Mesci_5469 .
    GeneIDi 10120969.
    KEGGi mci:Mesci_5469.
    PATRICi 45261192. VBIMesCic160642_6005.

    Phylogenomic databases

    HOGENOMi HOG000222508.
    KOi K01971.
    OMAi PFPPMEA.

    Enzyme and pathway databases

    BioCyci MCIC765698:GHQ5-5531-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of chromosome of Mesorhizobium ciceri bv. biserrulae WSM1271."
      Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Nandasena K., Reeve W.G., Howieson J.G., O'Hara G., Tiwari R.P., Woyke T.
      Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: HAMBI 2942 / LMG 23838 / WSM1271Imported.

    Entry informationi

    Entry nameiE8TEF1_MESCW
    AccessioniPrimary (citable) accession number: E8TEF1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 5, 2011
    Last sequence update: April 5, 2011
    Last modified: October 1, 2014
    This is version 23 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3