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E8SWW3

- E8SWW3_GEOS2

UniProt

E8SWW3 - E8SWW3_GEOS2

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Protein
Submitted name: Alpha amylase catalytic region protein
Gene
GYMC52_3303
Organism
Geobacillus sp. (strain Y412MC52)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. calcium ion binding Source: InterPro
  2. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciGSP550542:GH52-3418-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha amylase catalytic region proteinImported
Gene namesi
Ordered Locus Names:GYMC52_3303Imported
OrganismiGeobacillus sp. (strain Y412MC52)Imported
Taxonomic identifieri550542 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeGeobacillus
ProteomesiUP000002223: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3535 PredictedImported
Add
BLAST
Chaini36 – 549514 Predicted
PRO_5000697243Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliE8SWW3.

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

HOGENOMiHOG000094847.
KOiK01176.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

E8SWW3-1 [UniParc]FASTAAdd to Basket

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MLTFHRIIRK GWMFLLAFLL TASLFCPTGQ PAKAAAPFNG TMMQYFEWYL    50
PDDGALWTKV ANEANNLSSL GITALWLPPA YKGTSRSDVG YGVYDLYDLG 100
EFNQKGTVRT KYGTKAQYLQ AIQAAHAAGM QVYADVVFDH KGGADGTEWV 150
DAVEVNPSDR NQEISGTYQI QAWTKFDFPG RGNTYSSFKW RWYHFDGVDW 200
DESRKLSRIY KFRGIGKAWD WEVDTENGNY DYLMYADLDM DHPEVVTELK 250
NWGKWYVNTT NIDGFRLDAV KHIKFSFFPD WLSYVRSQTG KPLFTVGEYW 300
SYDINKLHNY ITKTNGTMSL FDAPLHNKFY TASKSGGAFD MRTLMTNTLM 350
KDQPTLAVTF VDNHDTEPGQ ALQSWVDPWF KPLAYAFILT RQEGYPCVFY 400
GDYYGIPQYN IPSLKSKIDP LLIARRDYAY GTQHDYLDHS DIIGWTREGV 450
TEKPGSGLAA LITDGPGGSK WMYVGKQHAG KVFYDLTGNR SDTVTINSDG 500
WGEFKVNGGS VSVWVPRKTT VSTIAWPITT RPWTGEFVRW TEPRLVAWP 549
Length:549
Mass (Da):62,611
Last modified:April 5, 2011 - v1
Checksum:i41212347066E7994
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002442 Genomic DNA. Translation: ADU95655.1.
RefSeqiYP_004133798.1. NC_014915.1.

Genome annotation databases

EnsemblBacteriaiADU95655; ADU95655; GYMC52_3303.
GeneIDi10110021.
KEGGigya:GYMC52_3303.
PATRICi45228542. VBIGeoSp94955_3579.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002442 Genomic DNA. Translation: ADU95655.1 .
RefSeqi YP_004133798.1. NC_014915.1.

3D structure databases

ProteinModelPortali E8SWW3.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADU95655 ; ADU95655 ; GYMC52_3303 .
GeneIDi 10110021.
KEGGi gya:GYMC52_3303.
PATRICi 45228542. VBIGeoSp94955_3579.

Phylogenomic databases

HOGENOMi HOG000094847.
KOi K01176.

Enzyme and pathway databases

BioCyci GSP550542:GH52-3418-MONOMER.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view ]
PIRSFi PIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of chromosome of Geobacillus sp. Y412MC52."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Chertkov O., Munk C., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Mead D., Woyke T.
    Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Y412MC52Imported.

Entry informationi

Entry nameiE8SWW3_GEOS2
AccessioniPrimary (citable) accession number: E8SWW3
Entry historyi
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: October 16, 2013
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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