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E8SWW3 (E8SWW3_GEOS2) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:GYMC52_3303 EMBL ADU95655.1
OrganismGeobacillus sp. (strain Y412MC52) [Complete proteome] [HAMAP] EMBL ADU95655.1
Taxonomic identifier550542 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesBacillaceaeGeobacillus

Protein attributes

Sequence length549 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3535 Potential EMBL ADU95655.1
Chain36 – 549514 Potential
PRO_5000697243

Sequences

Sequence LengthMass (Da)Tools
E8SWW3 [UniParc].

Last modified April 5, 2011. Version 1.
Checksum: 41212347066E7994

FASTA54962,611
        10         20         30         40         50         60 
MLTFHRIIRK GWMFLLAFLL TASLFCPTGQ PAKAAAPFNG TMMQYFEWYL PDDGALWTKV 

        70         80         90        100        110        120 
ANEANNLSSL GITALWLPPA YKGTSRSDVG YGVYDLYDLG EFNQKGTVRT KYGTKAQYLQ 

       130        140        150        160        170        180 
AIQAAHAAGM QVYADVVFDH KGGADGTEWV DAVEVNPSDR NQEISGTYQI QAWTKFDFPG 

       190        200        210        220        230        240 
RGNTYSSFKW RWYHFDGVDW DESRKLSRIY KFRGIGKAWD WEVDTENGNY DYLMYADLDM 

       250        260        270        280        290        300 
DHPEVVTELK NWGKWYVNTT NIDGFRLDAV KHIKFSFFPD WLSYVRSQTG KPLFTVGEYW 

       310        320        330        340        350        360 
SYDINKLHNY ITKTNGTMSL FDAPLHNKFY TASKSGGAFD MRTLMTNTLM KDQPTLAVTF 

       370        380        390        400        410        420 
VDNHDTEPGQ ALQSWVDPWF KPLAYAFILT RQEGYPCVFY GDYYGIPQYN IPSLKSKIDP 

       430        440        450        460        470        480 
LLIARRDYAY GTQHDYLDHS DIIGWTREGV TEKPGSGLAA LITDGPGGSK WMYVGKQHAG 

       490        500        510        520        530        540 
KVFYDLTGNR SDTVTINSDG WGEFKVNGGS VSVWVPRKTT VSTIAWPITT RPWTGEFVRW 


TEPRLVAWP 

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References

[1]"Complete sequence of chromosome of Geobacillus sp. Y412MC52."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Chertkov O., Munk C., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Mead D., Woyke T.
Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Y412MC52 EMBL ADU95655.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002442 Genomic DNA. Translation: ADU95655.1.
RefSeqYP_004133798.1. NC_014915.1.

3D structure databases

ProteinModelPortalE8SWW3.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADU95655; ADU95655; GYMC52_3303.
GeneID10110021.
KEGGgya:GYMC52_3303.
PATRIC45228542. VBIGeoSp94955_3579.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000094847.
KOK01176.

Enzyme and pathway databases

BioCycGSP550542:GH52-3418-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameE8SWW3_GEOS2
AccessionPrimary (citable) accession number: E8SWW3
Entry history
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: October 16, 2013
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)