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E8SVP8

- E8SVP8_GEOS2

UniProt

E8SVP8 - E8SVP8_GEOS2

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Protein
Submitted name:

Alpha amylase catalytic region protein

Gene

GYMC52_0636

Organism
Geobacillus sp. (strain Y412MC52)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. cation binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciGSP550542:GH52-710-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha amylase catalytic region proteinImported
Gene namesi
Ordered Locus Names:GYMC52_0636Imported
OrganismiGeobacillus sp. (strain Y412MC52)Imported
Taxonomic identifieri550542 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeGeobacillus
ProteomesiUP000002223: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2424 PotentialImportedAdd
BLAST

Structurei

3D structure databases

ProteinModelPortaliE8SVP8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

HOGENOMiHOG000085496.
KOiK01176.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

E8SVP8-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MGNRLFMLLV LPFLLFYAMP AAAAEKEERT WQDEAIYFIM VDRFNNMDPT
60 70 80 90 100
NDQNVNVNDP KGYFGGDLKG VTAKLDYIKE MGFTAIWLTP IFKNMPGGYH
110 120 130 140 150
GYWIEDFYQV DPHFGTLGDL KTLVKEAHKR DMKVILDFVA NHVGYNHPWL
160 170 180 190 200
HDPTKKDWFH PKKEIFDWND QTQLENGWMY GLPDLAQENP EVKTYLIDVA
210 220 230 240 250
KWWIKETDID GYRLDTVRHV PKSFWQEFAK EVKSVKKDFF LLGEVWSDDP
260 270 280 290 300
RYIAEYGKYG IDGFVDYPLY GAVKQSLARR DASLRPLYDV WEYNKTFYDR
310 320 330 340 350
PYLLGSFLDN HDTVRFTKLA IDNRNNPISR IKLAMTYLFT APGIPIMYYG
360 370 380 390 400
TEIAMNGGQD PDNRRLMDFR ADPEIIDYLK KIGPLRQQLP SLRRGDFTLL
410 420 430 440 450
YEKDGMAVWK RQYEDETTVI AINNTGETQH VHLTNDQLPK NKELRGFLLD
460 470 480 490 500
DLVRGDDDGY DLVLDRETAE VYKLREKTGI NIPFIAAIVA VYALFLLFLY
510
LVKKRAKRIH E
Length:511
Mass (Da):59,816
Last modified:April 5, 2011 - v1
Checksum:i80E2B6E356624D31
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002442 Genomic DNA. Translation: ADU93127.1.
RefSeqiYP_004131270.1. NC_014915.1.

Genome annotation databases

EnsemblBacteriaiADU93127; ADU93127; GYMC52_0636.
GeneIDi10107313.
KEGGigya:GYMC52_0636.
PATRICi45222605. VBIGeoSp94955_0679.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002442 Genomic DNA. Translation: ADU93127.1 .
RefSeqi YP_004131270.1. NC_014915.1.

3D structure databases

ProteinModelPortali E8SVP8.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADU93127 ; ADU93127 ; GYMC52_0636 .
GeneIDi 10107313.
KEGGi gya:GYMC52_0636.
PATRICi 45222605. VBIGeoSp94955_0679.

Phylogenomic databases

HOGENOMi HOG000085496.
KOi K01176.

Enzyme and pathway databases

BioCyci GSP550542:GH52-710-MONOMER.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of chromosome of Geobacillus sp. Y412MC52."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Chertkov O., Munk C., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Mead D., Woyke T.
    Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Y412MC52Imported.

Entry informationi

Entry nameiE8SVP8_GEOS2
AccessioniPrimary (citable) accession number: E8SVP8
Entry historyi
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: November 26, 2014
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3