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E8SVP8

- E8SVP8_GEOS2

UniProt

E8SVP8 - E8SVP8_GEOS2

Protein
Submitted name:

Alpha amylase catalytic region protein

Gene

GYMC52_0636

Organism
Geobacillus sp. (strain Y412MC52)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 20 (01 Oct 2014)
      Sequence version 1 (05 Apr 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. catalytic activity Source: InterPro
    2. cation binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Enzyme and pathway databases

    BioCyciGSP550542:GH52-710-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Alpha amylase catalytic region proteinImported
    Gene namesi
    Ordered Locus Names:GYMC52_0636Imported
    OrganismiGeobacillus sp. (strain Y412MC52)Imported
    Taxonomic identifieri550542 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeGeobacillus
    ProteomesiUP000002223: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2424 PotentialImportedAdd
    BLAST
    Chaini25 – 511487 PotentialPRO_5000697201Add
    BLAST

    Structurei

    3D structure databases

    ProteinModelPortaliE8SVP8.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Keywords - Domaini

    SignalImported

    Phylogenomic databases

    HOGENOMiHOG000085496.
    KOiK01176.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    E8SVP8-1 [UniParc]FASTAAdd to Basket

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    MGNRLFMLLV LPFLLFYAMP AAAAEKEERT WQDEAIYFIM VDRFNNMDPT    50
    NDQNVNVNDP KGYFGGDLKG VTAKLDYIKE MGFTAIWLTP IFKNMPGGYH 100
    GYWIEDFYQV DPHFGTLGDL KTLVKEAHKR DMKVILDFVA NHVGYNHPWL 150
    HDPTKKDWFH PKKEIFDWND QTQLENGWMY GLPDLAQENP EVKTYLIDVA 200
    KWWIKETDID GYRLDTVRHV PKSFWQEFAK EVKSVKKDFF LLGEVWSDDP 250
    RYIAEYGKYG IDGFVDYPLY GAVKQSLARR DASLRPLYDV WEYNKTFYDR 300
    PYLLGSFLDN HDTVRFTKLA IDNRNNPISR IKLAMTYLFT APGIPIMYYG 350
    TEIAMNGGQD PDNRRLMDFR ADPEIIDYLK KIGPLRQQLP SLRRGDFTLL 400
    YEKDGMAVWK RQYEDETTVI AINNTGETQH VHLTNDQLPK NKELRGFLLD 450
    DLVRGDDDGY DLVLDRETAE VYKLREKTGI NIPFIAAIVA VYALFLLFLY 500
    LVKKRAKRIH E 511
    Length:511
    Mass (Da):59,816
    Last modified:April 5, 2011 - v1
    Checksum:i80E2B6E356624D31
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002442 Genomic DNA. Translation: ADU93127.1.
    RefSeqiYP_004131270.1. NC_014915.1.

    Genome annotation databases

    EnsemblBacteriaiADU93127; ADU93127; GYMC52_0636.
    GeneIDi10107313.
    KEGGigya:GYMC52_0636.
    PATRICi45222605. VBIGeoSp94955_0679.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002442 Genomic DNA. Translation: ADU93127.1 .
    RefSeqi YP_004131270.1. NC_014915.1.

    3D structure databases

    ProteinModelPortali E8SVP8.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADU93127 ; ADU93127 ; GYMC52_0636 .
    GeneIDi 10107313.
    KEGGi gya:GYMC52_0636.
    PATRICi 45222605. VBIGeoSp94955_0679.

    Phylogenomic databases

    HOGENOMi HOG000085496.
    KOi K01176.

    Enzyme and pathway databases

    BioCyci GSP550542:GH52-710-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of chromosome of Geobacillus sp. Y412MC52."
      US DOE Joint Genome Institute
      Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Chertkov O., Munk C., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Mead D., Woyke T.
      Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Y412MC52Imported.

    Entry informationi

    Entry nameiE8SVP8_GEOS2
    AccessioniPrimary (citable) accession number: E8SVP8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 5, 2011
    Last sequence update: April 5, 2011
    Last modified: October 1, 2014
    This is version 20 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3