SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

E8SVP8

- E8SVP8_GEOS2

UniProt

E8SVP8 - E8SVP8_GEOS2

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name:

Alpha amylase catalytic region protein

Gene
GYMC52_0636
Organism
Geobacillus sp. (strain Y412MC52)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. cation binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciGSP550542:GH52-710-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha amylase catalytic region proteinImported
Gene namesi
Ordered Locus Names:GYMC52_0636Imported
OrganismiGeobacillus sp. (strain Y412MC52)Imported
Taxonomic identifieri550542 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeGeobacillus
ProteomesiUP000002223: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2424 PredictedImportedAdd
BLAST
Chaini25 – 511487 PredictedPRO_5000697201Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliE8SVP8.

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

HOGENOMiHOG000085496.
KOiK01176.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

E8SVP8-1 [UniParc]FASTAAdd to Basket

« Hide

MGNRLFMLLV LPFLLFYAMP AAAAEKEERT WQDEAIYFIM VDRFNNMDPT    50
NDQNVNVNDP KGYFGGDLKG VTAKLDYIKE MGFTAIWLTP IFKNMPGGYH 100
GYWIEDFYQV DPHFGTLGDL KTLVKEAHKR DMKVILDFVA NHVGYNHPWL 150
HDPTKKDWFH PKKEIFDWND QTQLENGWMY GLPDLAQENP EVKTYLIDVA 200
KWWIKETDID GYRLDTVRHV PKSFWQEFAK EVKSVKKDFF LLGEVWSDDP 250
RYIAEYGKYG IDGFVDYPLY GAVKQSLARR DASLRPLYDV WEYNKTFYDR 300
PYLLGSFLDN HDTVRFTKLA IDNRNNPISR IKLAMTYLFT APGIPIMYYG 350
TEIAMNGGQD PDNRRLMDFR ADPEIIDYLK KIGPLRQQLP SLRRGDFTLL 400
YEKDGMAVWK RQYEDETTVI AINNTGETQH VHLTNDQLPK NKELRGFLLD 450
DLVRGDDDGY DLVLDRETAE VYKLREKTGI NIPFIAAIVA VYALFLLFLY 500
LVKKRAKRIH E 511
Length:511
Mass (Da):59,816
Last modified:April 5, 2011 - v1
Checksum:i80E2B6E356624D31
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002442 Genomic DNA. Translation: ADU93127.1.
RefSeqiYP_004131270.1. NC_014915.1.

Genome annotation databases

EnsemblBacteriaiADU93127; ADU93127; GYMC52_0636.
GeneIDi10107313.
KEGGigya:GYMC52_0636.
PATRICi45222605. VBIGeoSp94955_0679.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002442 Genomic DNA. Translation: ADU93127.1 .
RefSeqi YP_004131270.1. NC_014915.1.

3D structure databases

ProteinModelPortali E8SVP8.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADU93127 ; ADU93127 ; GYMC52_0636 .
GeneIDi 10107313.
KEGGi gya:GYMC52_0636.
PATRICi 45222605. VBIGeoSp94955_0679.

Phylogenomic databases

HOGENOMi HOG000085496.
KOi K01176.

Enzyme and pathway databases

BioCyci GSP550542:GH52-710-MONOMER.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of chromosome of Geobacillus sp. Y412MC52."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Chertkov O., Munk C., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Mead D., Woyke T.
    Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Y412MC52Imported.

Entry informationi

Entry nameiE8SVP8_GEOS2
AccessioniPrimary (citable) accession number: E8SVP8
Entry historyi
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: October 16, 2013
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

Similar proteinsi