SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

E8SJ17

- E8SJ17_STAPH

UniProt

E8SJ17 - E8SJ17_STAPH

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

50S ribosomal protein L1

Gene
rplA, SPSINT_0212
Organism
Staphylococcus pseudintermedius (strain HKU10-03)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release By similarity.UniRule annotation
Protein L1 is also a translational repressor protein, it controls the translation of the L11 operon by binding to its mRNA By similarity.UniRule annotation

GO - Molecular functioni

  1. rRNA binding Source: UniProtKB-HAMAP
  2. structural constituent of ribosome Source: InterPro
  3. tRNA binding Source: UniProtKB-KW

GO - Biological processi

  1. regulation of translation Source: UniProtKB-KW
  2. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

RepressorUniRule annotation, Ribonucleoprotein, Ribosomal proteinUniRule annotationImported

Keywords - Biological processi

Translation regulationUniRule annotation

Keywords - Ligandi

RNA-binding, rRNA-bindingUniRule annotation, tRNA-bindingUniRule annotation

Enzyme and pathway databases

BioCyciSPSE937773:GH0P-232-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L1UniRule annotation
Gene namesi
Name:rplAUniRule annotation
Ordered Locus Names:SPSINT_0212Imported
OrganismiStaphylococcus pseudintermedius (strain HKU10-03)Imported
Taxonomic identifieri937773 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesStaphylococcus
ProteomesiUP000007469: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. large ribosomal subunit Source: InterPro
Complete GO annotation...

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit By similarity.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L1P family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000207015.
KOiK02863.

Family and domain databases

Gene3Di3.30.190.20. 2 hits.
3.40.50.790. 1 hit.
HAMAPiMF_01318_B. Ribosomal_L1_B.
InterProiIPR005878. Ribosom_L1_bac-type.
IPR002143. Ribosomal_L1.
IPR023674. Ribosomal_L1-like.
IPR028364. Ribosomal_L1/biogenesis.
IPR016094. Ribosomal_L1_2-a/b-sand.
IPR016095. Ribosomal_L1_3-a/b-sand.
IPR023673. Ribosomal_L1_CS.
[Graphical view]
PfamiPF00687. Ribosomal_L1. 1 hit.
[Graphical view]
PIRSFiPIRSF002155. Ribosomal_L1. 1 hit.
SUPFAMiSSF56808. SSF56808. 1 hit.
TIGRFAMsiTIGR01169. rplA_bact. 1 hit.
PROSITEiPS01199. RIBOSOMAL_L1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E8SJ17-1 [UniParc]FASTAAdd to Basket

« Hide

MAKKGKKYQE ALNKVDRQAL YTVEEAIRLA QETSIANFDA SVEVAFRLGI    50
DTRKNDQQIR GAVVLPHGTG KSQRVLVFAK GDKIAEAEAA GADYVGDAEY 100
VNKIQQGWFD FDVVVATPDM MGEVGKLGRV LGPKGLMPNP KTGTVTMDVK 150
KAVEEIKAGK VEYRAEKAGI VHASIGKVSF ETEKLVENFK TLQDVLTKAK 200
PSSAKGTYFK SVAVTTTMGP GIKVDTATFK L 231
Length:231
Mass (Da):25,001
Last modified:April 5, 2011 - v1
Checksum:i5D9B8DDFAF984946
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002439 Genomic DNA. Translation: ADV04741.1.
RefSeqiYP_004148377.1. NC_014925.1.

Genome annotation databases

EnsemblBacteriaiADV04741; ADV04741; SPSINT_0212.
GeneIDi10134971.
KEGGissd:SPSINT_0212.
PATRICi45363607. VBIStaPse177932_0211.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002439 Genomic DNA. Translation: ADV04741.1 .
RefSeqi YP_004148377.1. NC_014925.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADV04741 ; ADV04741 ; SPSINT_0212 .
GeneIDi 10134971.
KEGGi ssd:SPSINT_0212.
PATRICi 45363607. VBIStaPse177932_0211.

Phylogenomic databases

HOGENOMi HOG000207015.
KOi K02863.

Enzyme and pathway databases

BioCyci SPSE937773:GH0P-232-MONOMER.

Family and domain databases

Gene3Di 3.30.190.20. 2 hits.
3.40.50.790. 1 hit.
HAMAPi MF_01318_B. Ribosomal_L1_B.
InterProi IPR005878. Ribosom_L1_bac-type.
IPR002143. Ribosomal_L1.
IPR023674. Ribosomal_L1-like.
IPR028364. Ribosomal_L1/biogenesis.
IPR016094. Ribosomal_L1_2-a/b-sand.
IPR016095. Ribosomal_L1_3-a/b-sand.
IPR023673. Ribosomal_L1_CS.
[Graphical view ]
Pfami PF00687. Ribosomal_L1. 1 hit.
[Graphical view ]
PIRSFi PIRSF002155. Ribosomal_L1. 1 hit.
SUPFAMi SSF56808. SSF56808. 1 hit.
TIGRFAMsi TIGR01169. rplA_bact. 1 hit.
PROSITEi PS01199. RIBOSOMAL_L1. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Complete genome sequence of Staphylococcus pseudintermedius."
    Tse H., Tsoi H.W., Leung S.P., Urquhart I.J., Lau S.K.P., Woo P.C.Y., Yuen K.Y.
    Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: HKU10-03.
  2. "Complete genome sequence of the veterinary pathogen Staphylococcus pseudintermedius strain HKU10-03, isolated in a case of canine pyoderma."
    Tse H., Tsoi H.W., Leung S.P., Urquhart I.J., Lau S.K., Woo P.C., Yuen K.Y.
    J. Bacteriol. 193:1783-1784(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HKU10-03Imported.

Entry informationi

Entry nameiE8SJ17_STAPH
AccessioniPrimary (citable) accession number: E8SJ17
Entry historyi
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: February 19, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

Similar proteinsi