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Protein
Submitted name:

DNA polymerase LigD, polymerase domain protein

Gene

ML5_1895

Organism
Micromonospora sp. (strain L5)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA primase activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciMSP648999:GHVN-1922-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA polymerase LigD, polymerase domain proteinImported
Gene namesi
Ordered Locus Names:ML5_1895Imported
OrganismiMicromonospora sp. (strain L5)Imported
Taxonomic identifieri648999 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicromonosporineaeMicromonosporaceaeMicromonospora
ProteomesiUP000008685: Chromosome

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000244654.
OMAiFHPWPVR.

Family and domain databases

InterProiIPR002755. DNA_primase_S.
IPR014145. LigD_pol.
[Graphical view]
PfamiPF01896. DNA_primase_S. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.

Sequencei

Sequence statusi: Complete.

E8SBZ0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAGKGAVEEI EVAGHAVRLS SPDRVIFPQR GFTKADVFRY YLAVGDGIMR
60 70 80 90 100
ALRDRPTTLQ RFPDGIEGEM FFQKRVPQRG VPPWVSTARI AFPSGRPADE
110 120 130 140 150
LCPADLAHVA WAAQMGTVVF HPWPVRAADT DRPDELRVDL DPQPGTDFAD
160 170 180 190 200
AVTAAAELRG LLDELGVPGW PKTSGGRGVH VYLRIQPRWT FVEVRRATIA
210 220 230 240 250
LARELERRRP ELVTTAWWKE ERGERVFVDF NQMARDRTIA CAYSLRANAR
260 270 280 290 300
ATVSTPVDWD ELPEVDPDDF HLGTVPARFA ERGDPHVGID DAPWDITPLL
310 320 330 340
EWAERDAADG LGDMPYPPEY PKMPGEPKRV QPSKDRDRPR P
Length:341
Mass (Da):38,285
Last modified:April 5, 2011 - v1
Checksum:iC94CF5F39FA80D40
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002399 Genomic DNA. Translation: ADU07423.1.
RefSeqiWP_013474530.1. NC_014815.1.
YP_004081574.1. NC_014815.1.

Genome annotation databases

EnsemblBacteriaiADU07423; ADU07423; ML5_1895.
GeneIDi10057395.
KEGGimil:ML5_1895.
PATRICi45271696. VBIMicSp154089_1920.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002399 Genomic DNA. Translation: ADU07423.1.
RefSeqiWP_013474530.1. NC_014815.1.
YP_004081574.1. NC_014815.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADU07423; ADU07423; ML5_1895.
GeneIDi10057395.
KEGGimil:ML5_1895.
PATRICi45271696. VBIMicSp154089_1920.

Phylogenomic databases

HOGENOMiHOG000244654.
OMAiFHPWPVR.

Enzyme and pathway databases

BioCyciMSP648999:GHVN-1922-MONOMER.

Family and domain databases

InterProiIPR002755. DNA_primase_S.
IPR014145. LigD_pol.
[Graphical view]
PfamiPF01896. DNA_primase_S. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: L5Imported.

Entry informationi

Entry nameiE8SBZ0_MICSL
AccessioniPrimary (citable) accession number: E8SBZ0
Entry historyi
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: March 4, 2015
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.