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E8S5C1 (E8S5C1_MICSL) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
ATP dependent DNA ligase EMBL ADU06928.1
Gene names
Ordered Locus Names:ML5_1390
OrganismMicromonospora sp. (strain L5) [Complete proteome] [HAMAP] EMBL ADU06928.1
Taxonomic identifier648999 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micromonosporineae › Micromonosporaceae › Micromonospora

Protein attributes

Sequence length274 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ADU06928.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
E8S5C1 [UniParc].

Last modified April 5, 2011. Version 1.
Checksum: 9539E38BABB25209

FASTA27430,300
        10         20         30         40         50         60 
MAGLLKVGSP PTEDHPMEYL TFHGEIPAGE YGGGRMIVHD TGTYRAEKWR DDEVIVVLDG 

        70         80         90        100        110        120 
ERTKGRYVLF ATGGRGRDWM IRRTDPAPEG WTPMPELVRP MLPAEGGRLP RDAAAWGYEL 

       130        140        150        160        170        180 
RWAGVRAMAY VSGGRLRLLD GDDTEVTGEY PWTRAMAEAL APAEAVIDGV LVRIDPAGRV 

       190        200        210        220        230        240 
RPPTRRDGQF LAVDLLWLEG VSSLDVPYAQ RRDLLDGLAL TGPHWQTPPW FPGVGADALW 

       250        260        270 
AAREQGLPGV VAKRLDSPYE PGRRSRHWLS IDAS

« Hide

References

[1]"Complete sequence of Micromonospora sp. L5."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Saunders E., Detter J.C., Han C., Tapia R., Land M., Hauser L., Jeffries C., Kyrpides N., Ivanova N., Ovchinnikova G., De Hoff P.L., Hirsch A.M., Woyke T.
Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: L5.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002399 Genomic DNA. Translation: ADU06928.1.
RefSeqYP_004081079.1. NC_014815.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADU06928; ADU06928; ML5_1390.
GeneID10056883.
KEGGmil:ML5_1390.
PATRIC45270652. VBIMicSp154089_1410.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000222509.
KOK01971.
OMAVRAMAYV.

Enzyme and pathway databases

BioCycMSP648999:GHVN-1410-MONOMER.

Family and domain databases

InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR014144. LigD_PE_domain.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE8S5C1_MICSL
AccessionPrimary (citable) accession number: E8S5C1
Entry history
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: May 29, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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