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Protein
Submitted name:

ATP dependent DNA ligase

Gene

ML5_1390

Organism
Micromonospora sp. (strain L5)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMSP648999:GHVN-1410-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:ML5_1390Imported
OrganismiMicromonospora sp. (strain L5)Imported
Taxonomic identifieri648999 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicromonosporineaeMicromonosporaceaeMicromonospora
ProteomesiUP000008685: Chromosome

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000222509.
KOiK01971.
OMAiLAKHTED.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR014144. LigD_PE_domain.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E8S5C1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAGLLKVGSP PTEDHPMEYL TFHGEIPAGE YGGGRMIVHD TGTYRAEKWR
60 70 80 90 100
DDEVIVVLDG ERTKGRYVLF ATGGRGRDWM IRRTDPAPEG WTPMPELVRP
110 120 130 140 150
MLPAEGGRLP RDAAAWGYEL RWAGVRAMAY VSGGRLRLLD GDDTEVTGEY
160 170 180 190 200
PWTRAMAEAL APAEAVIDGV LVRIDPAGRV RPPTRRDGQF LAVDLLWLEG
210 220 230 240 250
VSSLDVPYAQ RRDLLDGLAL TGPHWQTPPW FPGVGADALW AAREQGLPGV
260 270
VAKRLDSPYE PGRRSRHWLS IDAS
Length:274
Mass (Da):30,300
Last modified:April 5, 2011 - v1
Checksum:i9539E38BABB25209
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002399 Genomic DNA. Translation: ADU06928.1.
RefSeqiWP_013474209.1. NC_014815.1.
YP_004081079.1. NC_014815.1.

Genome annotation databases

EnsemblBacteriaiADU06928; ADU06928; ML5_1390.
GeneIDi10056883.
KEGGimil:ML5_1390.
PATRICi45270652. VBIMicSp154089_1410.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002399 Genomic DNA. Translation: ADU06928.1.
RefSeqiWP_013474209.1. NC_014815.1.
YP_004081079.1. NC_014815.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADU06928; ADU06928; ML5_1390.
GeneIDi10056883.
KEGGimil:ML5_1390.
PATRICi45270652. VBIMicSp154089_1410.

Phylogenomic databases

HOGENOMiHOG000222509.
KOiK01971.
OMAiLAKHTED.

Enzyme and pathway databases

BioCyciMSP648999:GHVN-1410-MONOMER.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR014144. LigD_PE_domain.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: L5Imported.

Entry informationi

Entry nameiE8S5C1_MICSL
AccessioniPrimary (citable) accession number: E8S5C1
Entry historyi
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: January 7, 2015
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.