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E8S106 (E8S106_MICSL) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:ML5_3556 EMBL ADU09070.1
OrganismMicromonospora sp. (strain L5) [Complete proteome] [HAMAP] EMBL ADU09070.1
Taxonomic identifier648999 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesMicromonosporineaeMicromonosporaceaeMicromonospora

Protein attributes

Sequence length481 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Keywords
   DomainSignal EMBL ADU09070.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3333 Potential EMBL ADU09070.1
Chain34 – 481448 Potential EMBL ADU09070.1
PRO_5000696606

Sequences

Sequence LengthMass (Da)Tools
E8S106 [UniParc].

Last modified April 5, 2011. Version 1.
Checksum: 2BB29D6A0152DB77

FASTA48152,372
        10         20         30         40         50         60 
MHRRRCRAAA LALGLAASLL VPLTAAAPPA AAATPGAKKV IVQLFEWNWT SVAAECTSTL 

        70         80         90        100        110        120 
GPKGYGYVQV SPPQEHVNSS PWWVSYQPVS YRIESRKGTR AQFQSMVNTC HAAGVKVIVD 

       130        140        150        160        170        180 
AVVNHMSGQE NGGTGWAGSS YGHYNYPGVY SAQDFHYCGR NGNNDIANYN DRYEVQNCEL 

       190        200        210        220        230        240 
VNLADLKTES EYVRGRLAAY LNDLLSLGVD GFRLDGSKHM PAADIAAIKA KLNRSAYLVQ 

       250        260        270        280        290        300 
EVIYGAGEPI QPTEYTGNGD VHEFRYGKDL ARMFNNERLA YLRNFGESWG YLSSAKAVVF 

       310        320        330        340        350        360 
TDNHDTQREG GVLTYRNRGT YALANAFMLA WPYGTPAVMS SFTYSGRDQG PPADGSNRIT 

       370        380        390        400        410        420 
NVTCYSGWEC EHRWPVIANM VGFRNATEGA GVSNWYDNGY QHIAFSRTGK GYLTINDEDG 

       430        440        450        460        470        480 
AVNGRSYYTG LPAGRYCDVI HGTFSNGSCS GPVITVDSSG WFAANIAAHD GIAIHIGAKL 


S 

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References

[1]"Complete sequence of Micromonospora sp. L5."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Saunders E., Detter J.C., Han C., Tapia R., Land M., Hauser L., Jeffries C., Kyrpides N., Ivanova N., Ovchinnikova G., De Hoff P.L., Hirsch A.M., Woyke T.
Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: L5.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002399 Genomic DNA. Translation: ADU09070.1.
RefSeqYP_004083221.1. NC_014815.1.

3D structure databases

ProteinModelPortalE8S106.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADU09070; ADU09070; ML5_3556.
GeneID10059082.
KEGGmil:ML5_3556.
PATRIC45275087. VBIMicSp154089_3582.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000253313.
KOK01176.
OMAVNHMSAG.

Enzyme and pathway databases

BioCycMSP648999:GHVN-3609-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameE8S106_MICSL
AccessionPrimary (citable) accession number: E8S106
Entry history
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: October 16, 2013
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)