E8RZE6 (E8RZE6_MICSL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Deoxyribose-phosphate aldolase EMBL ADU06588.1
EC=4.1.2.4 EMBL ADU06588.1

Gene names

Ordered Locus Names:

ML5_1048

Organism

Micromonospora sp. (strain L5) [Complete proteome] [HAMAP] EMBL ADU06588.1

Taxonomic identifier

648999 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micromonosporineae › Micromonosporaceae › Micromonospora

Protein attributes

Sequence length	319 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5-phosphate By similarity. SAAS SAAS011343
Catalytic activity	2-deoxy-D-ribose 5-phosphate = D-glyceraldehyde 3-phosphate + acetaldehyde. SAAS SAAS011343
Pathway	Carbohydrate degradation; 2-deoxy-D-ribose 1-phosphate degradation; D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-alpha-D-ribose 1-phosphate: step 2/2. SAAS SAAS011343
Subcellular location	Cytoplasm By similarity SAAS SAAS011343.

Ontologies

Keywords
Cellular component	Cytoplasm SAAS SAAS011343
Ligand	Schiff base SAAS SAAS011343
Molecular function	Lyase SAAS SAAS011343 EMBL ADU06588.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	deoxyribonucleotide catabolic process Inferred from electronic annotation. Source: InterPro deoxyribose phosphate catabolic process Inferred from electronic annotation. Source: UniProtKB-UniPathway
Cellular_component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular_function	deoxyribose-phosphate aldolase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E8RZE6 [UniParc]. Last modified April 5, 2011. Version 1. Checksum: A79570A3D620149F	FASTA	319	33,768
	10 20 30 40 50 60 MTATTTSARS DLTELGRSET ALRTFLHGLP GVDQVGAEQR AAQLGTRSIK TTAKAEAIDL 70 80 90 100 110 120 AIRMVDLTTL EGADTPGKVR ALAAKALRPD PADPSCPHVG AVCVYPSMVP YVAEVLRGSG 130 140 150 160 170 180 VHLASVATAF PSGQAPLEIK LADVRAAVEA GADEIDMVIN RGAFLAGRYS DVYDEIVATK 190 200 210 220 230 240 EACGDAHLKV ILETGELATY DNVRRASWLA MLAGGDFIKT STGKVPVAAT LPVTLVMLEA 250 260 270 280 290 300 VRDFRAATGR QVGVKPAGGI KTTKDAIKYL VMVNETVGAD WLSPDWFRFG ASSLLNDLLM 310 QRTKLTTGVY AGPDYFTLD

References

[1]

"Complete sequence of Micromonospora sp. L5." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Saunders E., Detter J.C., Han C., Tapia R., Land M., Hauser L., Jeffries C., Kyrpides N., Ivanova N., Ovchinnikova G., De Hoff P.L., Hirsch A.M., Woyke T. Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: L5.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002399 Genomic DNA. Translation: ADU06588.1.
RefSeq	YP_004080739.1. NC_014815.1.
3D structure databases
ProteinModelPortal	E8RZE6.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADU06588; ADU06588; ML5_1048.
GeneID	10056538.
KEGG	mil:ML5_1048.
PATRIC	45269937. VBIMicSp154089_1060.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000241644.
KO	K01619.
OMA	MVIDRGA.
Enzyme and pathway databases
BioCyc	MSP648999:GHVN-1064-MONOMER.
UniPathway	UPA00002; UER00468.
Family and domain databases
Gene3D	3.20.20.70. 1 hit.
InterPro	IPR013785. Aldolase_TIM. IPR011343. DeoC. IPR002915. DeoC/FbaB/lacD_aldolase. [Graphical view]
PANTHER	PTHR10889. PTHR10889. 1 hit.
Pfam	PF01791. DeoC. 1 hit. [Graphical view]
PIRSF	PIRSF001357. DeoC. 1 hit.
TIGRFAMs	TIGR00126. deoC. 1 hit.
ProtoNet	Search...

Entry information

Entry name

E8RZE6_MICSL

Accession

Primary (citable) accession number: E8RZE6

Entry history

Integrated into UniProtKB/TrEMBL:	April 5, 2011
Last sequence update:	April 5, 2011
Last modified:	May 1, 2013
This is version 16 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)