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E8RRK9

- E8RRK9_ASTEC

UniProt

E8RRK9 - E8RRK9_ASTEC

Protein

50S ribosomal protein L20

Gene

rplT

Organism
Asticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 / CB 48)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 18 (01 Oct 2014)
      Sequence version 1 (05 Apr 2011)
      Previous versions | rss
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    Functioni

    Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.UniRule annotation

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-KW
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal proteinUniRule annotationImported

    Keywords - Ligandi

    RNA-binding, rRNA-bindingUniRule annotation

    Enzyme and pathway databases

    BioCyciAEXC573065:GJ7A-1812-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L20UniRule annotation
    Gene namesi
    Name:rplTUniRule annotation
    Ordered Locus Names:Astex_1790Imported
    OrganismiAsticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 / CB 48)Imported
    Taxonomic identifieri573065 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaCaulobacteralesCaulobacteraceaeAsticcacaulis
    ProteomesiUP000001492: Chromosome 1

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L20P family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000035046.
    KOiK02887.

    Family and domain databases

    HAMAPiMF_00382. Ribosomal_L20.
    InterProiIPR005813. Ribosomal_L20.
    [Graphical view]
    PANTHERiPTHR10986. PTHR10986. 1 hit.
    PfamiPF00453. Ribosomal_L20. 1 hit.
    [Graphical view]
    PRINTSiPR00062. RIBOSOMALL20.
    TIGRFAMsiTIGR01032. rplT_bact. 1 hit.
    PROSITEiPS00937. RIBOSOMAL_L20. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E8RRK9-1 [UniParc]FASTAAdd to Basket

    « Hide

    MARVKRGVVS HARHKKVLKQ AKGFYGRRKN TIRTAKAAVD KAGQYAYRDR    50
    RVNKRNFRAL WIQRINAAAR VEGFTYSQFI HGLNLAGIEL DRKALAALAA 100
    NDAPAFAAVA EKVRAALAA 119
    Length:119
    Mass (Da):13,189
    Last modified:April 5, 2011 - v1
    Checksum:iE3FBAA761460BA03
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002395 Genomic DNA. Translation: ADU13454.1.
    RefSeqiYP_004087605.1. NC_014816.1.

    Genome annotation databases

    EnsemblBacteriaiADU13454; ADU13454; Astex_1790.
    GeneIDi10053361.
    KEGGiaex:Astex_1790.
    PATRICi45151544. VBIAstExc23432_1761.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002395 Genomic DNA. Translation: ADU13454.1 .
    RefSeqi YP_004087605.1. NC_014816.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADU13454 ; ADU13454 ; Astex_1790 .
    GeneIDi 10053361.
    KEGGi aex:Astex_1790.
    PATRICi 45151544. VBIAstExc23432_1761.

    Phylogenomic databases

    HOGENOMi HOG000035046.
    KOi K02887.

    Enzyme and pathway databases

    BioCyci AEXC573065:GJ7A-1812-MONOMER.

    Family and domain databases

    HAMAPi MF_00382. Ribosomal_L20.
    InterProi IPR005813. Ribosomal_L20.
    [Graphical view ]
    PANTHERi PTHR10986. PTHR10986. 1 hit.
    Pfami PF00453. Ribosomal_L20. 1 hit.
    [Graphical view ]
    PRINTSi PR00062. RIBOSOMALL20.
    TIGRFAMsi TIGR01032. rplT_bact. 1 hit.
    PROSITEi PS00937. RIBOSOMAL_L20. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of chromosome 1 of Asticcacaulis excentricus CB 48."
      US DOE Joint Genome Institute
      Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Teshima H., Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L., Jeffries C., Kyrpides N., Ivanova N., Ovchinnikova G., Brun Y.V., Woyke T.
      Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 15261 / DSM 4724 / VKM B-1370 / CB 48Imported.

    Entry informationi

    Entry nameiE8RRK9_ASTEC
    AccessioniPrimary (citable) accession number: E8RRK9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 5, 2011
    Last sequence update: April 5, 2011
    Last modified: October 1, 2014
    This is version 18 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3