E8RRK9 (E8RRK9_ASTEC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
50S ribosomal protein L20 HAMAP-Rule MF_00382 RuleBase RU000560

Gene names

Name:	rplT HAMAP-Rule MF_00382
Ordered Locus Names:	Astex_1790 EMBL ADU13454.1

Organism

Asticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 / CB 48) [Complete proteome] [HAMAP] EMBL ADU13454.1

Taxonomic identifier

573065 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Caulobacterales › Caulobacteraceae › Asticcacaulis › Asticcacaulis excentricus

Protein attributes

Sequence length	119 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit By similarity. HAMAP-Rule MF_00382 RuleBase RU000560
Sequence similarities	Belongs to the ribosomal protein L20P family. HAMAP-Rule MF_00382 RuleBase RU000560

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding HAMAP-Rule MF_00382 RuleBase RU000560
Molecular function	Ribonucleoprotein Ribosomal protein HAMAP-Rule MF_00382 RuleBase RU000560 EMBL ADU13454.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	ribosomal large subunit assembly Inferred from electronic annotation. Source: HAMAP translation Inferred from electronic annotation. Source: InterPro
Cellular_component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	rRNA binding Inferred from electronic annotation. Source: HAMAP structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E8RRK9 [UniParc]. Last modified April 5, 2011. Version 1. Checksum: E3FBAA761460BA03	FASTA	119	13,189
	10 20 30 40 50 60 MARVKRGVVS HARHKKVLKQ AKGFYGRRKN TIRTAKAAVD KAGQYAYRDR RVNKRNFRAL 70 80 90 100 110 WIQRINAAAR VEGFTYSQFI HGLNLAGIEL DRKALAALAA NDAPAFAAVA EKVRAALAA

References

[1]

"Complete sequence of chromosome 1 of Asticcacaulis excentricus CB 48." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Teshima H., Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L., Jeffries C., Kyrpides N., Ivanova N., Ovchinnikova G., Brun Y.V., Woyke T. Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 15261 / DSM 4724 / VKM B-1370 / CB 48.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002395 Genomic DNA. Translation: ADU13454.1.
RefSeq	YP_004087605.1. NC_014816.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADU13454; ADU13454; Astex_1790.
GeneID	10053361.
KEGG	aex:Astex_1790.
PATRIC	45151544. VBIAstExc23432_1761.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000035046.
KO	K02887.
Enzyme and pathway databases
BioCyc	AEXC573065:GJ7A-1812-MONOMER.
Family and domain databases
HAMAP	MF_00382. Ribosomal_L20.
InterPro	IPR005813. Ribosomal_L20. [Graphical view]
PANTHER	PTHR10986. PTHR10986. 1 hit.
Pfam	PF00453. Ribosomal_L20. 1 hit. [Graphical view]
PRINTS	PR00062. RIBOSOMALL20.
TIGRFAMs	TIGR01032. rplT_bact. 1 hit.
PROSITE	PS00937. RIBOSOMAL_L20. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

E8RRK9_ASTEC

Accession

Primary (citable) accession number: E8RRK9

Entry history

Integrated into UniProtKB/TrEMBL:	April 5, 2011
Last sequence update:	April 5, 2011
Last modified:	April 3, 2013
This is version 15 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)