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E8RRK9

- E8RRK9_ASTEC

UniProt

E8RRK9 - E8RRK9_ASTEC

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Protein

50S ribosomal protein L20

Gene

rplT

Organism
Asticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 / CB 48)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.UniRule annotation

GO - Molecular functioni

  1. rRNA binding Source: UniProtKB-KW
  2. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinUniRule annotation

Keywords - Ligandi

RNA-binding, rRNA-bindingUniRule annotation

Enzyme and pathway databases

BioCyciAEXC573065:GJ7A-1812-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L20UniRule annotation
Gene namesi
Name:rplTUniRule annotation
Ordered Locus Names:Astex_1790Imported
OrganismiAsticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 / CB 48)Imported
Taxonomic identifieri573065 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaCaulobacteralesCaulobacteraceaeAsticcacaulis
ProteomesiUP000001492: Chromosome 1

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L20P family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000035046.
KOiK02887.

Family and domain databases

HAMAPiMF_00382. Ribosomal_L20.
InterProiIPR005813. Ribosomal_L20.
[Graphical view]
PANTHERiPTHR10986. PTHR10986. 1 hit.
PfamiPF00453. Ribosomal_L20. 1 hit.
[Graphical view]
PRINTSiPR00062. RIBOSOMALL20.
TIGRFAMsiTIGR01032. rplT_bact. 1 hit.
PROSITEiPS00937. RIBOSOMAL_L20. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E8RRK9-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MARVKRGVVS HARHKKVLKQ AKGFYGRRKN TIRTAKAAVD KAGQYAYRDR
60 70 80 90 100
RVNKRNFRAL WIQRINAAAR VEGFTYSQFI HGLNLAGIEL DRKALAALAA
110
NDAPAFAAVA EKVRAALAA
Length:119
Mass (Da):13,189
Last modified:April 5, 2011 - v1
Checksum:iE3FBAA761460BA03
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002395 Genomic DNA. Translation: ADU13454.1.
RefSeqiWP_013479284.1. NC_014816.1.
YP_004087605.1. NC_014816.1.

Genome annotation databases

EnsemblBacteriaiADU13454; ADU13454; Astex_1790.
GeneIDi10053361.
KEGGiaex:Astex_1790.
PATRICi45151544. VBIAstExc23432_1761.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002395 Genomic DNA. Translation: ADU13454.1 .
RefSeqi WP_013479284.1. NC_014816.1.
YP_004087605.1. NC_014816.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADU13454 ; ADU13454 ; Astex_1790 .
GeneIDi 10053361.
KEGGi aex:Astex_1790.
PATRICi 45151544. VBIAstExc23432_1761.

Phylogenomic databases

HOGENOMi HOG000035046.
KOi K02887.

Enzyme and pathway databases

BioCyci AEXC573065:GJ7A-1812-MONOMER.

Family and domain databases

HAMAPi MF_00382. Ribosomal_L20.
InterProi IPR005813. Ribosomal_L20.
[Graphical view ]
PANTHERi PTHR10986. PTHR10986. 1 hit.
Pfami PF00453. Ribosomal_L20. 1 hit.
[Graphical view ]
PRINTSi PR00062. RIBOSOMALL20.
TIGRFAMsi TIGR01032. rplT_bact. 1 hit.
PROSITEi PS00937. RIBOSOMAL_L20. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of chromosome 1 of Asticcacaulis excentricus CB 48."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Teshima H., Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L., Jeffries C., Kyrpides N., Ivanova N., Ovchinnikova G., Brun Y.V., Woyke T.
    Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 15261 / DSM 4724 / VKM B-1370 / CB 48Imported.

Entry informationi

Entry nameiE8RRK9_ASTEC
AccessioniPrimary (citable) accession number: E8RRK9
Entry historyi
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: October 29, 2014
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3