E8RBP5 (E8RBP5_DESPD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Radical SAM domain protein EMBL ADW17756.1

Gene names

Ordered Locus Names:

Despr_1604

Organism

Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) [Complete proteome] [HAMAP] EMBL ADW17756.1

Taxonomic identifier

577650 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › delta/epsilon subdivisions › Deltaproteobacteria › Desulfobacterales › Desulfobulbaceae › Desulfobulbus › Desulfobulbus propionicus

Protein attributes

Sequence length	439 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	cofactor biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular_function	4 iron, 4 sulfur cluster binding Inferred from electronic annotation. Source: InterPro transferase activity, transferring alkyl or aryl (other than methyl) groups Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E8RBP5 [UniParc]. Last modified April 5, 2011. Version 1. Checksum: E1C9C6EBCF834745	FASTA	439	48,237
	10 20 30 40 50 60 MTMDRKEILH WLRCDDPKEL EQLWRLADRA RQQHVGEAVH LRGLVEISNY CARSCHYCGL 70 80 90 100 110 120 RAPNRQVSRY RLSAEEILDC ADQAVRLGYG TLVLQSGEDD RIEAEWLASL LRHIKATTPL 130 140 150 160 170 180 ALTLSLGERS EDDLRIWREA GADRYLLRFE TSDRALYRAI HPDRGARVSD RLALLRQLKS 190 200 210 220 230 240 LGYETGSGVM VGIPGQSYAI LADDILLFRE LDLDMIGIGP FIAHPDTPLG QAASPLPGET 250 260 270 280 290 300 QVPPSIGMTC KAVALARILR PDANIPATTA VAVMDAWQGR ELALRCGANV IMPNLTPARF 310 320 330 340 350 360 REHYTIYPGK ADRIEAAEQS DQQIRSQIKA MGRGIGSGQG GRKSGTQTEP AAPATLRIAV 370 380 390 400 410 420 CMGSSCFSRG NNSQAIDTLR HCVEDAGLVP DISGHLCENL CTQGPNITIG ETIYSNVQPS 430 CFPELLKHHL ASTKEGRDG

References

[1]

"Complete genome sequence of Desulfobulbus propionicus type strain (1pr3)." Pagani I., Lapidus A., Nolan M., Lucas S., Hammon N., Deshpande S., Cheng J.F., Chertkov O., Davenport K., Tapia R., Han C., Goodwin L., Pitluck S., Liolios K., Mavromatis K., Ivanova N., Mikhailova N., Pati A. , Chen A., Palaniappan K., Land M., Hauser L., Chang Y.J., Jeffries C.D., Detter J.C., Brambilla E., Kannan K.P., Djao O.D., Rohde M., Pukall R., Spring S., Goker M., Sikorski J., Woyke T., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.P. Stand. Genomic Sci. 4:100-110(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 33891 / DSM 2032 / 1pr3.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002364 Genomic DNA. Translation: ADW17756.1.
RefSeq	YP_004195047.1. NC_014972.1.
3D structure databases
ProteinModelPortal	E8RBP5.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADW17756; ADW17756; Despr_1604.
GeneID	10174329.
KEGG	dpr:Despr_1604.
PATRIC	46936779. VBIDesPro114934_1711.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000287484.
KO	K01012.
OMA	KDVNIAA.
Enzyme and pathway databases
BioCyc	DPRO577650:GH80-1630-MONOMER.
Family and domain databases
Gene3D	3.20.20.70. 1 hit. 3.40.30.10. 1 hit.
InterPro	IPR013785. Aldolase_TIM. IPR006638. Elp3/MiaB/NifB. IPR024021. FeFe-hyd_HydE_rSAM. IPR005244. FO_synthase_su2-like. IPR007197. rSAM. IPR012336. Thioredoxin-like_fold. [Graphical view]
Pfam	PF04055. Radical_SAM. 1 hit. [Graphical view]
PIRSF	PIRSF004762. CHP00423. 1 hit.
SMART	SM00729. Elp3. 1 hit. [Graphical view]
SUPFAM	SSF52833. Thiordxn-like_fd. 1 hit.
TIGRFAMs	TIGR03956. rSAM_HydE. 1 hit.
ProtoNet	Search...

Entry information

Entry name

E8RBP5_DESPD

Accession

Primary (citable) accession number: E8RBP5

Entry history

Integrated into UniProtKB/TrEMBL:	April 5, 2011
Last sequence update:	April 5, 2011
Last modified:	April 3, 2013
This is version 15 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)