E8QSD0 (E8QSD0_HELPW) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alanine racemase EMBL ADU84894.1

Gene names

Ordered Locus Names:

HPSA_04550 EMBL ADU84894.1

Organism

Helicobacter pylori (strain SouthAfrica7) [Complete proteome] [HAMAP]

Taxonomic identifier

907239 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › delta/epsilon subdivisions › Epsilonproteobacteria › Campylobacterales › Helicobacteraceae › Helicobacter › Helicobacter pylori

Protein attributes

Sequence length	377 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. SAAS SAAS011079
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate SAAS SAAS011079
Molecular function	Isomerase SAAS SAAS011079
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	alanine metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E8QSD0 [UniParc]. Last modified April 5, 2011. Version 1. Checksum: B776639A6A360232	FASTA	377	42,188
	10 20 30 40 50 60 MLKRASFVEV DTSSLRHNFN AVKNAIPKDT HIMAVVKANA YGVGAIKASE IFLQEGAHYL 70 80 90 100 110 120 GVATLDEALE LRFHFPKTPI LILGYSPNSN AQMLVDNHLS AMIFSLEQAE IFSQIALKSK 130 140 150 160 170 180 KRLKVHLKID TGMHRLGLEP NFKSVEIIKK IRALKGLEVE GIFTHLSNAD ANIKTHAKNQ 190 200 210 220 230 240 MKAFNAFLEQ LLDQKIEFQY RHAYNSAGIL SLCNNNENRF LNLYRPGIML YGFYPSNEMK 250 260 270 280 290 300 ESCPTILKNV VSLKAQIVQI KRVKKGEFVG YGKHFYTNEE TLVGVLALGY ADGLARALGN 310 320 330 340 350 360 RIQVVINNQL APLIAKVCMD QCFIKLDGIE AKEGDEVILF GDKSTRANDA NEIATLLNTI 370 PYEVISTLSK RLERVYA

References

[1]	"Genome sequence of Helicobacter pylori strain SouthAfrica7." Kersulyte D., Segal I., Mistry R., Berg D.E. Submitted (NOV-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: SouthAfrica7.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002336 Genomic DNA. Translation: ADU84894.1.
RefSeq	YP_005771501.1. NC_017361.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADU84894; ADU84894; HPSA_04550.
GeneID	12349816.
KEGG	hes:HPSA_04550.
PATRIC	45400165. VBIHelPyl171460_0925.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01775.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
ProtoNet	Search...

Entry information

Entry name

E8QSD0_HELPW

Accession

Primary (citable) accession number: E8QSD0

Entry history

Integrated into UniProtKB/TrEMBL:	April 5, 2011
Last sequence update:	April 5, 2011
Last modified:	May 1, 2013
This is version 16 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)