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E8QGV2 (E8QGV2_HELP7) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 11. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Mechanosensitive channel MscS EMBL ADU80214.1
Gene names
Ordered Locus Names:HPIN_05000 EMBL ADU80214.1
OrganismHelicobacter pylori (strain India7) [Complete proteome] [HAMAP]
Taxonomic identifier907238 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Epsilonproteobacteria › Campylobacterales › Helicobacteraceae › Helicobacter ›

Protein attributes

Sequence length274 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Ontologies

Keywords
   Technical term3D-structure PDB 4HW9
Complete proteome
Gene Ontology (GO)
   Biological_processtransmembrane transport

Inferred from electronic annotation. Source: InterPro

   Cellular_componentmembrane

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
E8QGV2 [UniParc].

Last modified April 5, 2011. Version 1.
Checksum: 2DE532610A8825E7

FASTA27430,358
        10         20         30         40         50         60 
MDEIKTLLVD FFPQAKHFGI ILIKAVIVFC IGFYFSFFLR NKTMKLLSKK DEILANFVAQ 

        70         80         90        100        110        120 
VTFILILIIT TIIALSTLGV QTTSIITVLG TVGIAVALAL KDYLSSIAGG IILIILHPFK 

       130        140        150        160        170        180 
KGDIIEISGL EGKVEALNFF NTSLRLHDGR LAVLPNRSVA NSNIINSNNT ACRRIEWVCG 

       190        200        210        220        230        240 
VGYGSDIELV HKTIKDVIDA MDKIDKNMPT FIGITDFGSS SLNFTIRVWA KIEDGIFNVR 

       250        260        270 
SELIERIKNA LDANHIEIPF NKLDIAIKNQ DSSK

« Hide

References

« Hide 'large scale' references
[1]"Genome sequence of Helicobacter pylori strain India7."
Kersulyte D., Mukhopadhyay A., Choudhury A., Nair G.B., Berg D.E.
Submitted (NOV-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: India7.
[2]"Open and shut: Crystal structures of the dodecylmaltoside solubilized mechanosensitive channel of small conductance from E. coli and H. pylori at 4.4 A and 4.1 A resolution."
Lai J.Y., Poon Y.S., Kaiser J.T., Rees D.C.
Protein Sci. 0:0-0(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (4.14 ANGSTROMS) OF 1-272.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002331 Genomic DNA. Translation: ADU80214.1.
RefSeqYP_005782299.1. NC_017372.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4HW9X-ray4.14A/B/C/D/E/F/G1-272[»]
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADU80214; ADU80214; HPIN_05000.
GeneID12362426.
KEGGhpn:HPIN_05000.
PATRIC45422734. VBIHelPyl171055_0997.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK03442.

Family and domain databases

InterProIPR010920. LSM_dom.
IPR011066. MscC_channel_C.
IPR006685. MscS_channel.
IPR011014. MscS_channel_TM-2.
[Graphical view]
PfamPF00924. MS_channel. 1 hit.
[Graphical view]
SUPFAMSSF82689. MscC_channel_C. 1 hit.
SSF82861. MscS_transmembr. 1 hit.
SSF50182. Sm_like_riboprot. 1 hit.
ProtoNetSearch...

Entry information

Entry nameE8QGV2_HELP7
AccessionPrimary (citable) accession number: E8QGV2
Entry history
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: May 1, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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