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E8PJW4 (E8PJW4_THESS) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Elongation factor Tu HAMAP-Rule MF_00118

Short name=EF-Tu HAMAP-Rule MF_00118
Gene names
Name:tuf1 EMBL ADW20816.1
Synonyms:tuf HAMAP-Rule MF_00118, tuf2 EMBL ADW22849.1
Ordered Locus Names:TSC_c01740 EMBL ADW20816.1, TSC_c22460 EMBL ADW22849.1
OrganismThermus scotoductus (strain ATCC 700910 / SA-01) [Complete proteome] [HAMAP] EMBL ADW20816.1
Taxonomic identifier743525 [NCBI]
Taxonomic lineageBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus

Protein attributes

Sequence length406 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. RuleBase RU000325 HAMAP-Rule MF_00118

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. RuleBase RU000325 HAMAP-Rule MF_00118

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding82 – 865GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding137 – 1404GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
E8PJW4 [UniParc].

Last modified April 5, 2011. Version 1.
Checksum: 5FEEBC97E67DDDE9

FASTA40644,729
        10         20         30         40         50         60 
MAKGEFIRTK PHVNVGTIGH VDHGKTTLTA ALTFVAAAEN PNVEVKDYGE IDKAPEERAR 

        70         80         90        100        110        120 
GITINTAHVE YETAKRHYSH VDCPGHADYI KNMITGAAQM DGAILVVSAA DGPMPQTREH 

       130        140        150        160        170        180 
ILLARQVGVP YIVVFMNKVD MVDDPELLDL VEMEVRDLLN QYEFPGDEVP VIRGSALLAL 

       190        200        210        220        230        240 
EQMHKNPQTK RGENEWVDKI WELLDAIDEY IPTPVRDVDK PFLMPVEDVF TITGRGTVAT 

       250        260        270        280        290        300 
GRIERGKVKV GDEVEIVGLA PETRKTVVTG VEMHRKTLQE GIAGDNVGLL LRGVSREEVE 

       310        320        330        340        350        360 
RGQVLAKPGS ITPHTKFEAS VYILKKEEGG RHTGFFSGYR PQFYFRTTDV TGVVELPSGV 

       370        380        390        400 
EMVMPGDNVT FTVELIKPVA LEEGLRFAIR EGGRTVGAGV VTKILE 

« Hide

References

« Hide 'large scale' references
[1]"The genome sequence of Thermus scotoductus SA-01."
Gounder K., Liesegang H., Brzuszkiewicz E., Wollherr A., Daniel R., Gottschalk G., van Heerden E., Litthauer D.
Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 700910 / SA-01 and SA-01.
[2]"Sequence of the hyperplastic genome of the naturally competent Thermus scotoductus SA-01."
Gounder K., Brzuszkiewicz E., Liesegang H., Wollherr A., Daniel R., Gottschalk G., Reva O., Kumwenda B., Srivastava M., Bricio C., Berenguer J., van Heerden E., Litthauer D.
BMC Genomics 12:577-577(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: SA-01 EMBL ADW20816.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001962 Genomic DNA. Translation: ADW20816.1.
CP001962 Genomic DNA. Translation: ADW22849.1.
RefSeqYP_004201365.1. NC_014974.1.
YP_004203398.1. NC_014974.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADW20816; ADW20816; TSC_c01740.
ADW22849; ADW22849; TSC_c22460.
GeneID10176295.
10178367.
KEGGtsc:TSC_c01740.
tsc:TSC_c22460.
PATRIC47043192. VBITheSco147128_0162.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000229290.
KOK02358.

Enzyme and pathway databases

BioCycTSCO743525:GCD4-174-MONOMER.
TSCO743525:GCD4-2243-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE8PJW4_THESS
AccessionPrimary (citable) accession number: E8PJW4
Entry history
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: June 11, 2014
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)