Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

E8ND12 (E8ND12_MICTS) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:MTES_0687 EMBL BAJ73651.1
OrganismMicrobacterium testaceum (strain StLB037) [Complete proteome] [HAMAP] EMBL BAJ73651.1
Taxonomic identifier979556 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaeMicrobacteriaceaeMicrobacterium

Protein attributes

Sequence length739 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Cofactor

Binds 1 magnesium or manganese ion per subunit By similarity. PIRSR PIRSR009407-3

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Region132 – 1398Substrate binding By similarity PIRSR PIRSR009407-2

Sites

Metal binding3481Magnesium or manganese By similarity
Metal binding5461Magnesium or manganese By similarity
Metal binding5501Magnesium or manganese By similarity
Binding site1451Substrate By similarity PIRSR PIRSR009407-2
Binding site5451Substrate By similarity PIRSR PIRSR009407-2
Site2551Critical for catalysis By similarity PIRSR PIRSR009407-1
Site4181Critical for catalysis By similarity PIRSR PIRSR009407-1

Sequences

Sequence LengthMass (Da)Tools
E8ND12 [UniParc].

Last modified April 5, 2011. Version 1.
Checksum: AE64684BF8D2BAE5

FASTA73978,823
        10         20         30         40         50         60 
MPDSTIIYTY TDEAPALATA SFLPIVQAVT KQAGVDVETR DISLAGRILA AFPQRLTPEQ 

        70         80         90        100        110        120 
QVGDALAELG GLATLPEANI IKLPNISASI PQLKAAIAEL QAQGYDIPDY PDEASTVEDK 

       130        140        150        160        170        180 
DVRARYDRIK GSAVNPVLRE GNSDRRAPLA VKNYAKKHPH RNKAFAEGSK TRVATMGHDD 

       190        200        210        220        230        240 
FFSNEKSVVI ADDDVLTIQH VAADGTTTTL KEGLKVLQGE IVDATFLSAA ALDAFLADTL 

       250        260        270        280        290        300 
EQAKADDVLY SVHLKATMMK VSDPIIFGHV VKAFFADVFD RHGDALAAAG LTPNDGLGSI 

       310        320        330        340        350        360 
LAGLSNVEGG DGIASEIRDA LASGPRLSYV NSDKGITNLH VPSDVIVDAS MPALVRNGGK 

       370        380        390        400        410        420 
LWGVDGGEDD TLAVIPDSSY AGVYQATIED VIANGPLDPA TIGSVPNVGL MAQAAEEYGS 

       430        440        450        460        470        480 
HDKTFEIAAP GRVQVVASNG DVLLEHEVGA GDIWRATQTK DVAVRDWVKL AVTRARATGV 

       490        500        510        520        530        540 
PAVFWLDETR AHDRNLIAKV NEYLADHDTE GLTIEILAPA EATRYSLERI RRGEDTISVT 

       550        560        570        580        590        600 
GNVLRDYLTD LFPILEVGTS AKMLSIVPLL AGGGLFETGA GGSAPKHVQQ LVEEDYLRWD 

       610        620        630        640        650        660 
SLGEFFALAA SLEHLADTTG NKRARVLAQT LDAATGTFLE NDKSPGRALG TIDNRGSHFY 

       670        680        690        700        710        720 
LALYWAQELA KQTTDADLAA VFGPVAEKLA AEEQTIVAEL NAVQGHHAEI GGYYRPNTEL 

       730 
VEKVMRPSAT LNAVVDALR 

« Hide

References

« Hide 'large scale' references
[1]"Genome sequence of Microbacterium testaceum StLB037, an N-acylhomoserine lactone-degrading bacterium isolated from potato leaves."
Morohoshi T., Wang W.-Z., Someya N., Ikeda T.
J. Bacteriol. 193:2072-2073(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: StLB037 EMBL BAJ73651.1.
[2]"Genome sequence of Microbacterium testaceum StLB037."
Morohoshi T., Wang W.Z., Someya N., Ikeda T.
Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: StLB037.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP012052 Genomic DNA. Translation: BAJ73651.1.
RefSeqYP_004223531.1. NC_015125.1.

3D structure databases

ProteinModelPortalE8ND12.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAJ73651; BAJ73651; MTES_0687.
GeneID10217629.
KEGGmts:MTES_0687.
PATRIC46968441. VBIMicTes185510_0677.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000240860.
KOK00031.

Family and domain databases

Gene3D3.40.718.10. 3 hits.
InterProIPR004436. Isocitrate_DH_NADP_mono.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view]
PfamPF03971. IDH. 1 hit.
[Graphical view]
PIRSFPIRSF009407. IDH_monmr. 1 hit.
TIGRFAMsTIGR00178. monomer_idh. 1 hit.
ProtoNetSearch...

Entry information

Entry nameE8ND12_MICTS
AccessionPrimary (citable) accession number: E8ND12
Entry history
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: July 9, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)