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E8NC83

- E8NC83_MICTS

UniProt

E8NC83 - E8NC83_MICTS

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Protein
Submitted name:

ATP-dependent DNA ligase

Gene
MTES_3162
Organism
Microbacterium testaceum (strain StLB037)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro
  3. DNA primase activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:MTES_3162Imported
OrganismiMicrobacterium testaceum (strain StLB037)Imported
Taxonomic identifieri979556 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaeMicrobacteriaceaeMicrobacterium
ProteomesiUP000008975: Chromosome

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000222509.
KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E8NC83-1 [UniParc]FASTAAdd to Basket

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MVEQTVQIGG RRLRLSNLDK VLYPETGTTK GEVIDYYSRV AARLLPHVAD    50
RPVTRKRWPD GVGTADAPGE PFFAKALEPG APAWVRRFPI DHSSGAKDYP 100
LVDDLPTLVS LAQVASLELH VPQWRFSPDG ERQNPDRLVL DLDPGPGVGL 150
VECAEVARWA RAILRDIGLD PLPVTSGSKG IHLYAHLDGK QSSEAASAIA 200
KELARAIEAD HPDLVVSQMS KAARPGKVFI DWSQNNGSKT TIAPYSLRGR 250
AQPTVAAPRT WEELDDPALR HLLFTDVLER TGDPLAAVER ETGPLRAYIS 300
KRTAGRTPEP VPEAPHGEPA PEGLPRFVIQ EHHASRLHWD LRLEHGGVLV 350
SWAVPKGIPS TTAKNSLAVM TEDHPMQYLD FTGEIPRGEY GAGIMTVWDT 400
GTYELEKWRD DEVIATLQGR DDGPLGRVRV ALIRTEGRGE KSQWLLHRMK 450
TDAEGRPQAD GAPVVALDHG RVGRDPEPRG AAAGHADGDV DAPDGSRRGA 500
PSPADVRPML ATSATPGLAR AAAGRWGQAW VEMKWDGIRG IGLWDGRRLR 550
LRSRNGNDLT AAYPELTTVD LGLGPEPAII DGEIVALDPQ GRPSFPLLQK 600
RMNLAQPREI EREARRTPVH LYLFDVLSVG DRDVSPLPLA ERRGILESLA 650
QKATAPVVIP PVFDDVDAAV ATSGRFGLEG VVVKDPRSPY RRGERSEQWL 700
KVKHSRTQEV VVGGVRPGKG NRAGTIGSLL VGVPDPDGLR YAGRVGSGFS 750
EQTLARLSEL LAPLGSDADP FVGVPAADAR DAIWVRPELV AEVEFAEFTP 800
DGILRQARWR GLRPDKDPSE VVREG 825
Length:825
Mass (Da):89,802
Last modified:April 5, 2011 - v1
Checksum:i742E5CF1CEF59616
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP012052 Genomic DNA. Translation: BAJ76126.1.
RefSeqiYP_004226006.1. NC_015125.1.

Genome annotation databases

EnsemblBacteriaiBAJ76126; BAJ76126; MTES_3162.
GeneIDi10219913.
KEGGimts:MTES_3162.
PATRICi46973451. VBIMicTes185510_3146.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP012052 Genomic DNA. Translation: BAJ76126.1 .
RefSeqi YP_004226006.1. NC_015125.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAJ76126 ; BAJ76126 ; MTES_3162 .
GeneIDi 10219913.
KEGGi mts:MTES_3162.
PATRICi 46973451. VBIMicTes185510_3146.

Phylogenomic databases

HOGENOMi HOG000222509.
KOi K01971.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequence of Microbacterium testaceum StLB037, an N-acylhomoserine lactone-degrading bacterium isolated from potato leaves."
    Morohoshi T., Wang W.-Z., Someya N., Ikeda T.
    J. Bacteriol. 193:2072-2073(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: StLB037Imported.
  2. "Genome sequence of Microbacterium testaceum StLB037."
    Morohoshi T., Wang W.Z., Someya N., Ikeda T.
    Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: StLB037.

Entry informationi

Entry nameiE8NC83_MICTS
AccessioniPrimary (citable) accession number: E8NC83
Entry historyi
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: October 16, 2013
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

Similar proteinsi