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E8NC83

- E8NC83_MICTS

UniProt

E8NC83 - E8NC83_MICTS

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Protein
Submitted name:

ATP-dependent DNA ligase

Gene

MTES_3162

Organism
Microbacterium testaceum (strain StLB037)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro
  3. DNA primase activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:MTES_3162Imported
OrganismiMicrobacterium testaceum (strain StLB037)Imported
Taxonomic identifieri979556 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaeMicrobacteriaceaeMicrobacterium
ProteomesiUP000008975: Chromosome

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000222509.
KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E8NC83-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MVEQTVQIGG RRLRLSNLDK VLYPETGTTK GEVIDYYSRV AARLLPHVAD
60 70 80 90 100
RPVTRKRWPD GVGTADAPGE PFFAKALEPG APAWVRRFPI DHSSGAKDYP
110 120 130 140 150
LVDDLPTLVS LAQVASLELH VPQWRFSPDG ERQNPDRLVL DLDPGPGVGL
160 170 180 190 200
VECAEVARWA RAILRDIGLD PLPVTSGSKG IHLYAHLDGK QSSEAASAIA
210 220 230 240 250
KELARAIEAD HPDLVVSQMS KAARPGKVFI DWSQNNGSKT TIAPYSLRGR
260 270 280 290 300
AQPTVAAPRT WEELDDPALR HLLFTDVLER TGDPLAAVER ETGPLRAYIS
310 320 330 340 350
KRTAGRTPEP VPEAPHGEPA PEGLPRFVIQ EHHASRLHWD LRLEHGGVLV
360 370 380 390 400
SWAVPKGIPS TTAKNSLAVM TEDHPMQYLD FTGEIPRGEY GAGIMTVWDT
410 420 430 440 450
GTYELEKWRD DEVIATLQGR DDGPLGRVRV ALIRTEGRGE KSQWLLHRMK
460 470 480 490 500
TDAEGRPQAD GAPVVALDHG RVGRDPEPRG AAAGHADGDV DAPDGSRRGA
510 520 530 540 550
PSPADVRPML ATSATPGLAR AAAGRWGQAW VEMKWDGIRG IGLWDGRRLR
560 570 580 590 600
LRSRNGNDLT AAYPELTTVD LGLGPEPAII DGEIVALDPQ GRPSFPLLQK
610 620 630 640 650
RMNLAQPREI EREARRTPVH LYLFDVLSVG DRDVSPLPLA ERRGILESLA
660 670 680 690 700
QKATAPVVIP PVFDDVDAAV ATSGRFGLEG VVVKDPRSPY RRGERSEQWL
710 720 730 740 750
KVKHSRTQEV VVGGVRPGKG NRAGTIGSLL VGVPDPDGLR YAGRVGSGFS
760 770 780 790 800
EQTLARLSEL LAPLGSDADP FVGVPAADAR DAIWVRPELV AEVEFAEFTP
810 820
DGILRQARWR GLRPDKDPSE VVREG
Length:825
Mass (Da):89,802
Last modified:April 5, 2011 - v1
Checksum:i742E5CF1CEF59616
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP012052 Genomic DNA. Translation: BAJ76126.1.
RefSeqiYP_004226006.1. NC_015125.1.

Genome annotation databases

EnsemblBacteriaiBAJ76126; BAJ76126; MTES_3162.
GeneIDi10219913.
KEGGimts:MTES_3162.
PATRICi46973451. VBIMicTes185510_3146.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP012052 Genomic DNA. Translation: BAJ76126.1 .
RefSeqi YP_004226006.1. NC_015125.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAJ76126 ; BAJ76126 ; MTES_3162 .
GeneIDi 10219913.
KEGGi mts:MTES_3162.
PATRICi 46973451. VBIMicTes185510_3146.

Phylogenomic databases

HOGENOMi HOG000222509.
KOi K01971.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequence of Microbacterium testaceum StLB037, an N-acylhomoserine lactone-degrading bacterium isolated from potato leaves."
    Morohoshi T., Wang W.Z., Someya N., Ikeda T.
    J. Bacteriol. 193:2072-2073(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: StLB037Imported.
  2. "Genome sequence of Microbacterium testaceum StLB037."
    Morohoshi T., Wang W.Z., Someya N., Ikeda T.
    Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: StLB037.

Entry informationi

Entry nameiE8NC83_MICTS
AccessioniPrimary (citable) accession number: E8NC83
Entry historyi
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: October 1, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3