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E8NC83

- E8NC83_MICTS

UniProt

E8NC83 - E8NC83_MICTS

Protein
Submitted name:

ATP-dependent DNA ligase

Gene

MTES_3162

Organism
Microbacterium testaceum (strain StLB037)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 18 (01 Oct 2014)
      Sequence version 1 (05 Apr 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro
    3. DNA primase activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:MTES_3162Imported
    OrganismiMicrobacterium testaceum (strain StLB037)Imported
    Taxonomic identifieri979556 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaeMicrobacteriaceaeMicrobacterium
    ProteomesiUP000008975: Chromosome

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000222509.
    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR002755. DNA_primase_S.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF01896. DNA_primase_S. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E8NC83-1 [UniParc]FASTAAdd to Basket

    « Hide

    MVEQTVQIGG RRLRLSNLDK VLYPETGTTK GEVIDYYSRV AARLLPHVAD    50
    RPVTRKRWPD GVGTADAPGE PFFAKALEPG APAWVRRFPI DHSSGAKDYP 100
    LVDDLPTLVS LAQVASLELH VPQWRFSPDG ERQNPDRLVL DLDPGPGVGL 150
    VECAEVARWA RAILRDIGLD PLPVTSGSKG IHLYAHLDGK QSSEAASAIA 200
    KELARAIEAD HPDLVVSQMS KAARPGKVFI DWSQNNGSKT TIAPYSLRGR 250
    AQPTVAAPRT WEELDDPALR HLLFTDVLER TGDPLAAVER ETGPLRAYIS 300
    KRTAGRTPEP VPEAPHGEPA PEGLPRFVIQ EHHASRLHWD LRLEHGGVLV 350
    SWAVPKGIPS TTAKNSLAVM TEDHPMQYLD FTGEIPRGEY GAGIMTVWDT 400
    GTYELEKWRD DEVIATLQGR DDGPLGRVRV ALIRTEGRGE KSQWLLHRMK 450
    TDAEGRPQAD GAPVVALDHG RVGRDPEPRG AAAGHADGDV DAPDGSRRGA 500
    PSPADVRPML ATSATPGLAR AAAGRWGQAW VEMKWDGIRG IGLWDGRRLR 550
    LRSRNGNDLT AAYPELTTVD LGLGPEPAII DGEIVALDPQ GRPSFPLLQK 600
    RMNLAQPREI EREARRTPVH LYLFDVLSVG DRDVSPLPLA ERRGILESLA 650
    QKATAPVVIP PVFDDVDAAV ATSGRFGLEG VVVKDPRSPY RRGERSEQWL 700
    KVKHSRTQEV VVGGVRPGKG NRAGTIGSLL VGVPDPDGLR YAGRVGSGFS 750
    EQTLARLSEL LAPLGSDADP FVGVPAADAR DAIWVRPELV AEVEFAEFTP 800
    DGILRQARWR GLRPDKDPSE VVREG 825
    Length:825
    Mass (Da):89,802
    Last modified:April 5, 2011 - v1
    Checksum:i742E5CF1CEF59616
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP012052 Genomic DNA. Translation: BAJ76126.1.
    RefSeqiYP_004226006.1. NC_015125.1.

    Genome annotation databases

    EnsemblBacteriaiBAJ76126; BAJ76126; MTES_3162.
    GeneIDi10219913.
    KEGGimts:MTES_3162.
    PATRICi46973451. VBIMicTes185510_3146.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP012052 Genomic DNA. Translation: BAJ76126.1 .
    RefSeqi YP_004226006.1. NC_015125.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAJ76126 ; BAJ76126 ; MTES_3162 .
    GeneIDi 10219913.
    KEGGi mts:MTES_3162.
    PATRICi 46973451. VBIMicTes185510_3146.

    Phylogenomic databases

    HOGENOMi HOG000222509.
    KOi K01971.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR002755. DNA_primase_S.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF01896. DNA_primase_S. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of Microbacterium testaceum StLB037, an N-acylhomoserine lactone-degrading bacterium isolated from potato leaves."
      Morohoshi T., Wang W.Z., Someya N., Ikeda T.
      J. Bacteriol. 193:2072-2073(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: StLB037Imported.
    2. "Genome sequence of Microbacterium testaceum StLB037."
      Morohoshi T., Wang W.Z., Someya N., Ikeda T.
      Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: StLB037.

    Entry informationi

    Entry nameiE8NC83_MICTS
    AccessioniPrimary (citable) accession number: E8NC83
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 5, 2011
    Last sequence update: April 5, 2011
    Last modified: October 1, 2014
    This is version 18 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3