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E8NC83 (E8NC83_MICTS) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:MTES_3162 EMBL BAJ76126.1
OrganismMicrobacterium testaceum (strain StLB037) [Complete proteome] [HAMAP] EMBL BAJ76126.1
Taxonomic identifier979556 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaeMicrobacteriaceaeMicrobacterium

Protein attributes

Sequence length825 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
E8NC83 [UniParc].

Last modified April 5, 2011. Version 1.
Checksum: 742E5CF1CEF59616

FASTA82589,802
        10         20         30         40         50         60 
MVEQTVQIGG RRLRLSNLDK VLYPETGTTK GEVIDYYSRV AARLLPHVAD RPVTRKRWPD 

        70         80         90        100        110        120 
GVGTADAPGE PFFAKALEPG APAWVRRFPI DHSSGAKDYP LVDDLPTLVS LAQVASLELH 

       130        140        150        160        170        180 
VPQWRFSPDG ERQNPDRLVL DLDPGPGVGL VECAEVARWA RAILRDIGLD PLPVTSGSKG 

       190        200        210        220        230        240 
IHLYAHLDGK QSSEAASAIA KELARAIEAD HPDLVVSQMS KAARPGKVFI DWSQNNGSKT 

       250        260        270        280        290        300 
TIAPYSLRGR AQPTVAAPRT WEELDDPALR HLLFTDVLER TGDPLAAVER ETGPLRAYIS 

       310        320        330        340        350        360 
KRTAGRTPEP VPEAPHGEPA PEGLPRFVIQ EHHASRLHWD LRLEHGGVLV SWAVPKGIPS 

       370        380        390        400        410        420 
TTAKNSLAVM TEDHPMQYLD FTGEIPRGEY GAGIMTVWDT GTYELEKWRD DEVIATLQGR 

       430        440        450        460        470        480 
DDGPLGRVRV ALIRTEGRGE KSQWLLHRMK TDAEGRPQAD GAPVVALDHG RVGRDPEPRG 

       490        500        510        520        530        540 
AAAGHADGDV DAPDGSRRGA PSPADVRPML ATSATPGLAR AAAGRWGQAW VEMKWDGIRG 

       550        560        570        580        590        600 
IGLWDGRRLR LRSRNGNDLT AAYPELTTVD LGLGPEPAII DGEIVALDPQ GRPSFPLLQK 

       610        620        630        640        650        660 
RMNLAQPREI EREARRTPVH LYLFDVLSVG DRDVSPLPLA ERRGILESLA QKATAPVVIP 

       670        680        690        700        710        720 
PVFDDVDAAV ATSGRFGLEG VVVKDPRSPY RRGERSEQWL KVKHSRTQEV VVGGVRPGKG 

       730        740        750        760        770        780 
NRAGTIGSLL VGVPDPDGLR YAGRVGSGFS EQTLARLSEL LAPLGSDADP FVGVPAADAR 

       790        800        810        820 
DAIWVRPELV AEVEFAEFTP DGILRQARWR GLRPDKDPSE VVREG 

« Hide

References

« Hide 'large scale' references
[1]"Genome sequence of Microbacterium testaceum StLB037, an N-acylhomoserine lactone-degrading bacterium isolated from potato leaves."
Morohoshi T., Wang W.-Z., Someya N., Ikeda T.
J. Bacteriol. 193:2072-2073(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: StLB037 EMBL BAJ76126.1.
[2]"Genome sequence of Microbacterium testaceum StLB037."
Morohoshi T., Wang W.Z., Someya N., Ikeda T.
Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: StLB037.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP012052 Genomic DNA. Translation: BAJ76126.1.
RefSeqYP_004226006.1. NC_015125.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAJ76126; BAJ76126; MTES_3162.
GeneID10219913.
KEGGmts:MTES_3162.
PATRIC46973451. VBIMicTes185510_3146.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000222509.
KOK01971.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE8NC83_MICTS
AccessionPrimary (citable) accession number: E8NC83
Entry history
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: October 16, 2013
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)