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E8NA35

- E8NA35_MICTS

UniProt

E8NA35 - E8NA35_MICTS

Protein

DNA ligase

Gene

MTES_2901

Organism
Microbacterium testaceum (strain StLB037)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 19 (01 Oct 2014)
      Sequence version 1 (05 Apr 2011)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).UniRule annotation

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: UniProtKB-KW
    3. DNA replication Source: UniProtKB-KW

    Keywords - Molecular functioni

    LigaseUniRule annotationImported

    Keywords - Biological processi

    DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

    Keywords - Ligandi

    ATP-bindingUniRule annotation, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciMTES979556:GJFH-4351-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
    Gene namesi
    Ordered Locus Names:MTES_2901Imported
    OrganismiMicrobacterium testaceum (strain StLB037)Imported
    Taxonomic identifieri979556 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaeMicrobacteriaceaeMicrobacterium
    ProteomesiUP000008975: Chromosome

    Family & Domainsi

    Sequence similaritiesi

    Phylogenomic databases

    HOGENOMiHOG000036008.
    KOiK01971.

    Family and domain databases

    Gene3Di1.10.3260.10. 1 hit.
    2.40.50.140. 2 hits.
    InterProiIPR000977. DNA_ligase_ATP-dep.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR00574. dnl1. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E8NA35-1 [UniParc]FASTAAdd to Basket

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    MLFGDIETAL AAVTSTRSRL AKVDALAALL RELEPDEIGP AVGLLTAAPR    50
    QGRLGVGWRT LASRGGAHVP APALTIGEID EAFSRLVEVG GTGSAAVRTA 100
    LLDELASRAT ASEWQLLIRI MTGELRTGAL EGVLLDAIAR AADRDGAAVR 150
    RAAMLSGDLG ETAVLALTGT IDDLTAVGLV VGRGVQPMLA STAATVAEAL 200
    DAAGRASVEY KLDGARVQVH RHGDEVRVFT RTLADVTHRV PEIVEVARSL 250
    PVDDVILDGE TLSLDEDGAP RPFQETMARF GAETAREIAL RPWFFDILHV 300
    DGRDLIDEPL AARLDELERV AGEYRIPALM TDDPEAADAF ARAALQAGHE 350
    GVMVKGLDAA YSAGRRGKSW LKVKPVHTFD LVVLGVERGS GRRADWLSNL 400
    HLGARDPDGV FGEPGGFVMV GKTFKGLTDE LLRWQTAHFA ERATGEVPGG 450
    IRVVPDTVVE IAIDGVQRSV RYPGGVALRF ARVKAYRSDK PASEADTIAT 500
    LRAMLPGGGV GAAADDPSGG LDERTIS 527
    Length:527
    Mass (Da):55,704
    Last modified:April 5, 2011 - v1
    Checksum:iDAE3B22803535E73
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP012052 Genomic DNA. Translation: BAJ75865.1.
    RefSeqiWP_013585990.1. NC_015125.1.
    YP_004225745.1. NC_015125.1.

    Genome annotation databases

    EnsemblBacteriaiBAJ75865; BAJ75865; MTES_2901.
    GeneIDi10219668.
    KEGGimts:MTES_2901.
    PATRICi46972914. VBIMicTes185510_2881.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP012052 Genomic DNA. Translation: BAJ75865.1 .
    RefSeqi WP_013585990.1. NC_015125.1.
    YP_004225745.1. NC_015125.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAJ75865 ; BAJ75865 ; MTES_2901 .
    GeneIDi 10219668.
    KEGGi mts:MTES_2901.
    PATRICi 46972914. VBIMicTes185510_2881.

    Phylogenomic databases

    HOGENOMi HOG000036008.
    KOi K01971.

    Enzyme and pathway databases

    BioCyci MTES979556:GJFH-4351-MONOMER.

    Family and domain databases

    Gene3Di 1.10.3260.10. 1 hit.
    2.40.50.140. 2 hits.
    InterProi IPR000977. DNA_ligase_ATP-dep.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR00574. dnl1. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of Microbacterium testaceum StLB037, an N-acylhomoserine lactone-degrading bacterium isolated from potato leaves."
      Morohoshi T., Wang W.Z., Someya N., Ikeda T.
      J. Bacteriol. 193:2072-2073(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: StLB037Imported.
    2. "Genome sequence of Microbacterium testaceum StLB037."
      Morohoshi T., Wang W.Z., Someya N., Ikeda T.
      Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: StLB037.

    Entry informationi

    Entry nameiE8NA35_MICTS
    AccessioniPrimary (citable) accession number: E8NA35
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 5, 2011
    Last sequence update: April 5, 2011
    Last modified: October 1, 2014
    This is version 19 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3