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E8NA35 (E8NA35_MICTS) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
DNA ligase RuleBase RU000617
EC=6.5.1.1 RuleBase RU000617
Gene names
Ordered Locus Names:MTES_2901
OrganismMicrobacterium testaceum (strain StLB037) [Complete proteome] [HAMAP] EMBL BAJ75865.1
Taxonomic identifier979556 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Microbacteriaceae › Microbacterium ›

Protein attributes

Sequence length527 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m). RuleBase RU000617

Sequence similarities

Belongs to the ATP-dependent DNA ligase family. RuleBase RU004196

Sequences

Sequence LengthMass (Da)Tools
E8NA35 [UniParc].

Last modified April 5, 2011. Version 1.
Checksum: DAE3B22803535E73

FASTA52755,704
        10         20         30         40         50         60 
MLFGDIETAL AAVTSTRSRL AKVDALAALL RELEPDEIGP AVGLLTAAPR QGRLGVGWRT 

        70         80         90        100        110        120 
LASRGGAHVP APALTIGEID EAFSRLVEVG GTGSAAVRTA LLDELASRAT ASEWQLLIRI 

       130        140        150        160        170        180 
MTGELRTGAL EGVLLDAIAR AADRDGAAVR RAAMLSGDLG ETAVLALTGT IDDLTAVGLV 

       190        200        210        220        230        240 
VGRGVQPMLA STAATVAEAL DAAGRASVEY KLDGARVQVH RHGDEVRVFT RTLADVTHRV 

       250        260        270        280        290        300 
PEIVEVARSL PVDDVILDGE TLSLDEDGAP RPFQETMARF GAETAREIAL RPWFFDILHV 

       310        320        330        340        350        360 
DGRDLIDEPL AARLDELERV AGEYRIPALM TDDPEAADAF ARAALQAGHE GVMVKGLDAA 

       370        380        390        400        410        420 
YSAGRRGKSW LKVKPVHTFD LVVLGVERGS GRRADWLSNL HLGARDPDGV FGEPGGFVMV 

       430        440        450        460        470        480 
GKTFKGLTDE LLRWQTAHFA ERATGEVPGG IRVVPDTVVE IAIDGVQRSV RYPGGVALRF 

       490        500        510        520 
ARVKAYRSDK PASEADTIAT LRAMLPGGGV GAAADDPSGG LDERTIS

« Hide

References

« Hide 'large scale' references
[1]"Genome sequence of Microbacterium testaceum StLB037, an N-acylhomoserine lactone-degrading bacterium isolated from potato leaves."
Morohoshi T., Wang W.Z., Someya N., Ikeda T.
J. Bacteriol. 193:2072-2073(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: StLB037.
[2]"Genome sequence of Microbacterium testaceum StLB037."
Morohoshi T., Wang W.Z., Someya N., Ikeda T.
Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: StLB037.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AP012052 Genomic DNA. Translation: BAJ75865.1.
RefSeqYP_004225745.1. NC_015125.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAJ75865; BAJ75865; MTES_2901.
GeneID10219668.
KEGGmts:MTES_2901.
PATRIC46972914. VBIMicTes185510_2881.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000036008.
KOK01971.

Enzyme and pathway databases

BioCycMTES979556:GJFH-4351-MONOMER.

Family and domain databases

Gene3D1.10.3260.10. 1 hit.
2.40.50.140. 2 hits.
InterProIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. Nucleic_acid_OB. 1 hit.
SSF117018. SSF117018. 1 hit.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE8NA35_MICTS
AccessionPrimary (citable) accession number: E8NA35
Entry history
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: May 1, 2013
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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