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E8NA35

- E8NA35_MICTS

UniProt

E8NA35 - E8NA35_MICTS

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Protein
DNA ligase
Gene
MTES_2901
Organism
Microbacterium testaceum (strain StLB037)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).UniRule annotation

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: UniProtKB-KW
  3. DNA replication Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseUniRule annotationImported

Keywords - Biological processi

DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

Keywords - Ligandi

ATP-bindingUniRule annotation, Nucleotide-binding

Enzyme and pathway databases

BioCyciMTES979556:GJFH-4351-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:MTES_2901Imported
OrganismiMicrobacterium testaceum (strain StLB037)Imported
Taxonomic identifieri979556 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaeMicrobacteriaceaeMicrobacterium
ProteomesiUP000008975: Chromosome

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

HOGENOMiHOG000036008.
KOiK01971.

Family and domain databases

Gene3Di1.10.3260.10. 1 hit.
2.40.50.140. 2 hits.
InterProiIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR00574. dnl1. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E8NA35-1 [UniParc]FASTAAdd to Basket

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MLFGDIETAL AAVTSTRSRL AKVDALAALL RELEPDEIGP AVGLLTAAPR    50
QGRLGVGWRT LASRGGAHVP APALTIGEID EAFSRLVEVG GTGSAAVRTA 100
LLDELASRAT ASEWQLLIRI MTGELRTGAL EGVLLDAIAR AADRDGAAVR 150
RAAMLSGDLG ETAVLALTGT IDDLTAVGLV VGRGVQPMLA STAATVAEAL 200
DAAGRASVEY KLDGARVQVH RHGDEVRVFT RTLADVTHRV PEIVEVARSL 250
PVDDVILDGE TLSLDEDGAP RPFQETMARF GAETAREIAL RPWFFDILHV 300
DGRDLIDEPL AARLDELERV AGEYRIPALM TDDPEAADAF ARAALQAGHE 350
GVMVKGLDAA YSAGRRGKSW LKVKPVHTFD LVVLGVERGS GRRADWLSNL 400
HLGARDPDGV FGEPGGFVMV GKTFKGLTDE LLRWQTAHFA ERATGEVPGG 450
IRVVPDTVVE IAIDGVQRSV RYPGGVALRF ARVKAYRSDK PASEADTIAT 500
LRAMLPGGGV GAAADDPSGG LDERTIS 527
Length:527
Mass (Da):55,704
Last modified:April 5, 2011 - v1
Checksum:iDAE3B22803535E73
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP012052 Genomic DNA. Translation: BAJ75865.1.
RefSeqiWP_013585990.1. NC_015125.1.
YP_004225745.1. NC_015125.1.

Genome annotation databases

EnsemblBacteriaiBAJ75865; BAJ75865; MTES_2901.
GeneIDi10219668.
KEGGimts:MTES_2901.
PATRICi46972914. VBIMicTes185510_2881.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP012052 Genomic DNA. Translation: BAJ75865.1 .
RefSeqi WP_013585990.1. NC_015125.1.
YP_004225745.1. NC_015125.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAJ75865 ; BAJ75865 ; MTES_2901 .
GeneIDi 10219668.
KEGGi mts:MTES_2901.
PATRICi 46972914. VBIMicTes185510_2881.

Phylogenomic databases

HOGENOMi HOG000036008.
KOi K01971.

Enzyme and pathway databases

BioCyci MTES979556:GJFH-4351-MONOMER.

Family and domain databases

Gene3Di 1.10.3260.10. 1 hit.
2.40.50.140. 2 hits.
InterProi IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR00574. dnl1. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequence of Microbacterium testaceum StLB037, an N-acylhomoserine lactone-degrading bacterium isolated from potato leaves."
    Morohoshi T., Wang W.-Z., Someya N., Ikeda T.
    J. Bacteriol. 193:2072-2073(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: StLB037Imported.
  2. "Genome sequence of Microbacterium testaceum StLB037."
    Morohoshi T., Wang W.Z., Someya N., Ikeda T.
    Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: StLB037.

Entry informationi

Entry nameiE8NA35_MICTS
AccessioniPrimary (citable) accession number: E8NA35
Entry historyi
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: September 3, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

Similar proteinsi