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E8MS79

- E8MS79_BIFL1

UniProt

E8MS79 - E8MS79_BIFL1

Protein

Alanine racemase

Gene

BLIF_0479

Organism
Bifidobacterium longum subsp. infantis (strain 157F)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 27 (01 Oct 2014)
      Sequence version 1 (05 Apr 2011)
      Previous versions | rss
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    Functioni

    Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids.UniRule annotation

    Catalytic activityi

    L-alanine = D-alanine.UniRule annotationSAAS annotation

    Cofactori

    Pyridoxal phosphate.UniRule annotationSAAS annotation

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei63 – 631Proton acceptor; specific for D-alanineUniRule annotation
    Binding sitei165 – 1651SubstrateUniRule annotation
    Active sitei303 – 3031Proton acceptor; specific for L-alanineUniRule annotation
    Binding sitei367 – 3671Substrate; via amide nitrogenUniRule annotation

    GO - Molecular functioni

    1. alanine racemase activity Source: UniProtKB-HAMAP
    2. pyridoxal phosphate binding Source: UniProtKB-HAMAP

    GO - Biological processi

    1. D-alanine biosynthetic process Source: UniProtKB-UniPathway

    Keywords - Molecular functioni

    IsomeraseUniRule annotationSAAS annotation

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotationSAAS annotation

    Enzyme and pathway databases

    BioCyciBLON565040:GHFW-494-MONOMER.
    UniPathwayiUPA00042; UER00497.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Alanine racemaseUniRule annotation (EC:5.1.1.1UniRule annotation)
    Gene namesi
    Ordered Locus Names:BLIF_0479Imported
    OrganismiBifidobacterium longum subsp. infantis (strain 157F)Imported
    Taxonomic identifieri565040 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeBifidobacterialesBifidobacteriaceaeBifidobacterium
    ProteomesiUP000008150: Chromosome

    PTM / Processingi

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Modified residuei63 – 631N6-(pyridoxal phosphate)lysineUniRule annotation

    Structurei

    3D structure databases

    ProteinModelPortaliE8MS79.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the alanine racemase family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000031444.
    KOiK01775.
    OMAiLWQLEAI.

    Family and domain databases

    Gene3Di2.40.37.10. 1 hit.
    3.20.20.10. 1 hit.
    HAMAPiMF_01201. Ala_racemase.
    InterProiIPR000821. Ala_racemase.
    IPR009006. Ala_racemase/Decarboxylase_C.
    IPR011079. Ala_racemase_C.
    IPR001608. Ala_racemase_N.
    IPR020622. Ala_racemase_pyridoxalP-BS.
    IPR029066. PLP-binding_barrel.
    [Graphical view]
    PfamiPF00842. Ala_racemase_C. 1 hit.
    PF01168. Ala_racemase_N. 1 hit.
    [Graphical view]
    PRINTSiPR00992. ALARACEMASE.
    SMARTiSM01005. Ala_racemase_C. 1 hit.
    [Graphical view]
    SUPFAMiSSF50621. SSF50621. 1 hit.
    SSF51419. SSF51419. 1 hit.
    TIGRFAMsiTIGR00492. alr. 1 hit.
    PROSITEiPS00395. ALANINE_RACEMASE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E8MS79-1 [UniParc]FASTAAdd to Basket

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    MSMNAAPEIA FSSEQGKANY AAARRQYPAQ AIVNLKTMRD NMAHLVSVVG    50
    GPNSGTAVMG VVKADAYGHG LLPAALAALA GGATWLGTAQ SHEALLLRKL 100
    GIGPDRCRIL TWVYNGTEVP FDELIAADID VSVGSLPGID AVAAAARKLG 150
    KPARVHVKVD SGFGRNGFTP AGFDAALAKL VPLAKEGVLH IVGQWSHLAV 200
    ADSPDVPEFV SSTDRQIETF KDFTRRMEQA GIPPEIRHLA NTAATLDRPE 250
    IHFELTRPGI GLYGYEPDPA MGTPRDWHLT PAMRLQAQLG TVKDVEAGHG 300
    ISYGRTYLTP DNTSTAIVPL GYADGIHRSA SGFDMEGAKH VEKPGGPVRI 350
    MTTEGPKLYR VCGRVCMDQF IVDLHGSAAE LGVHEGDTVE LFGPGRGEDY 400
    VEPTADDWAR AADTISYEIF TCLRNRIPRL YEHAAEVLPA ADLAKLDPAT 450
    LL 452
    Length:452
    Mass (Da):48,328
    Last modified:April 5, 2011 - v1
    Checksum:i75C28E8031FDD596
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP010890 Genomic DNA. Translation: BAJ70623.1.
    RefSeqiWP_015713381.1. NC_015052.1.
    YP_004208401.1. NC_015052.1.

    Genome annotation databases

    EnsemblBacteriaiBAJ70623; BAJ70623; BLIF_0479.
    GeneIDi10207170.
    KEGGiblf:BLIF_0479.
    PATRICi46884924. VBIBifLon182273_0492.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP010890 Genomic DNA. Translation: BAJ70623.1 .
    RefSeqi WP_015713381.1. NC_015052.1.
    YP_004208401.1. NC_015052.1.

    3D structure databases

    ProteinModelPortali E8MS79.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAJ70623 ; BAJ70623 ; BLIF_0479 .
    GeneIDi 10207170.
    KEGGi blf:BLIF_0479.
    PATRICi 46884924. VBIBifLon182273_0492.

    Phylogenomic databases

    HOGENOMi HOG000031444.
    KOi K01775.
    OMAi LWQLEAI.

    Enzyme and pathway databases

    UniPathwayi UPA00042 ; UER00497 .
    BioCyci BLON565040:GHFW-494-MONOMER.

    Family and domain databases

    Gene3Di 2.40.37.10. 1 hit.
    3.20.20.10. 1 hit.
    HAMAPi MF_01201. Ala_racemase.
    InterProi IPR000821. Ala_racemase.
    IPR009006. Ala_racemase/Decarboxylase_C.
    IPR011079. Ala_racemase_C.
    IPR001608. Ala_racemase_N.
    IPR020622. Ala_racemase_pyridoxalP-BS.
    IPR029066. PLP-binding_barrel.
    [Graphical view ]
    Pfami PF00842. Ala_racemase_C. 1 hit.
    PF01168. Ala_racemase_N. 1 hit.
    [Graphical view ]
    PRINTSi PR00992. ALARACEMASE.
    SMARTi SM01005. Ala_racemase_C. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50621. SSF50621. 1 hit.
    SSF51419. SSF51419. 1 hit.
    TIGRFAMsi TIGR00492. alr. 1 hit.
    PROSITEi PS00395. ALANINE_RACEMASE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 157FImported.

    Entry informationi

    Entry nameiE8MS79_BIFL1
    AccessioniPrimary (citable) accession number: E8MS79
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 5, 2011
    Last sequence update: April 5, 2011
    Last modified: October 1, 2014
    This is version 27 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3