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E8MS79

- E8MS79_BIFL1

UniProt

E8MS79 - E8MS79_BIFL1

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Protein
Alanine racemase
Gene
BLIF_0479
Organism
Bifidobacterium longum subsp. infantis (strain 157F)
Status
Unreviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Functioni

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity.UniRule annotation

Catalytic activityi

L-alanine = D-alanine.UniRule annotationSAAS annotations

Cofactori

Pyridoxal phosphate By similarity.UniRule annotationSAAS annotations

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei63 – 631Proton acceptor; specific for D-alanine By similarityUniRule annotation
Binding sitei165 – 1651Substrate By similarityUniRule annotation
Active sitei303 – 3031Proton acceptor; specific for L-alanine By similarityUniRule annotation
Binding sitei367 – 3671Substrate; via amide nitrogen By similarityUniRule annotation

GO - Molecular functioni

  1. alanine racemase activity Source: UniProtKB-HAMAP
  2. pyridoxal phosphate binding Source: UniProtKB-HAMAP

GO - Biological processi

  1. D-alanine biosynthetic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationSAAS annotations

Keywords - Ligandi

Pyridoxal phosphateUniRule annotationSAAS annotations

Enzyme and pathway databases

BioCyciBLON565040:GHFW-494-MONOMER.
UniPathwayiUPA00042; UER00497.

Names & Taxonomyi

Protein namesi
Recommended name:
Alanine racemaseUniRule annotation (EC:5.1.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:BLIF_0479Imported
OrganismiBifidobacterium longum subsp. infantis (strain 157F)
Taxonomic identifieri565040 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeBifidobacterialesBifidobacteriaceaeBifidobacterium
ProteomesiUP000008150: Chromosome

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei63 – 631N6-(pyridoxal phosphate)lysine By similarityUniRule annotation

Structurei

3D structure databases

ProteinModelPortaliE8MS79.

Family & Domainsi

Sequence similaritiesi

Belongs to the alanine racemase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000031444.
KOiK01775.
OMAiLWQLEAI.

Family and domain databases

Gene3Di2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPiMF_01201. Ala_racemase.
InterProiIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamiPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSiPR00992. ALARACEMASE.
SMARTiSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMiSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsiTIGR00492. alr. 1 hit.
PROSITEiPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E8MS79-1 [UniParc]FASTAAdd to Basket

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MSMNAAPEIA FSSEQGKANY AAARRQYPAQ AIVNLKTMRD NMAHLVSVVG    50
GPNSGTAVMG VVKADAYGHG LLPAALAALA GGATWLGTAQ SHEALLLRKL 100
GIGPDRCRIL TWVYNGTEVP FDELIAADID VSVGSLPGID AVAAAARKLG 150
KPARVHVKVD SGFGRNGFTP AGFDAALAKL VPLAKEGVLH IVGQWSHLAV 200
ADSPDVPEFV SSTDRQIETF KDFTRRMEQA GIPPEIRHLA NTAATLDRPE 250
IHFELTRPGI GLYGYEPDPA MGTPRDWHLT PAMRLQAQLG TVKDVEAGHG 300
ISYGRTYLTP DNTSTAIVPL GYADGIHRSA SGFDMEGAKH VEKPGGPVRI 350
MTTEGPKLYR VCGRVCMDQF IVDLHGSAAE LGVHEGDTVE LFGPGRGEDY 400
VEPTADDWAR AADTISYEIF TCLRNRIPRL YEHAAEVLPA ADLAKLDPAT 450
LL 452
Length:452
Mass (Da):48,328
Last modified:April 5, 2011 - v1
Checksum:i75C28E8031FDD596
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP010890 Genomic DNA. Translation: BAJ70623.1.
RefSeqiWP_015713381.1. NC_015052.1.
YP_004208401.1. NC_015052.1.

Genome annotation databases

EnsemblBacteriaiBAJ70623; BAJ70623; BLIF_0479.
GeneIDi10207170.
KEGGiblf:BLIF_0479.
PATRICi46884924. VBIBifLon182273_0492.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP010890 Genomic DNA. Translation: BAJ70623.1 .
RefSeqi WP_015713381.1. NC_015052.1.
YP_004208401.1. NC_015052.1.

3D structure databases

ProteinModelPortali E8MS79.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAJ70623 ; BAJ70623 ; BLIF_0479 .
GeneIDi 10207170.
KEGGi blf:BLIF_0479.
PATRICi 46884924. VBIBifLon182273_0492.

Phylogenomic databases

HOGENOMi HOG000031444.
KOi K01775.
OMAi LWQLEAI.

Enzyme and pathway databases

UniPathwayi UPA00042 ; UER00497 .
BioCyci BLON565040:GHFW-494-MONOMER.

Family and domain databases

Gene3Di 2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPi MF_01201. Ala_racemase.
InterProi IPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
IPR029066. PLP-binding_barrel.
[Graphical view ]
Pfami PF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view ]
PRINTSi PR00992. ALARACEMASE.
SMARTi SM01005. Ala_racemase_C. 1 hit.
[Graphical view ]
SUPFAMi SSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsi TIGR00492. alr. 1 hit.
PROSITEi PS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 157FImported.

Entry informationi

Entry nameiE8MS79_BIFL1
AccessioniPrimary (citable) accession number: E8MS79
Entry historyi
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: September 3, 2014
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

Similar proteinsi