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E8MS79

- E8MS79_BIFL1

UniProt

E8MS79 - E8MS79_BIFL1

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Protein

Alanine racemase

Gene

BLIF_0479

Organism
Bifidobacterium longum subsp. infantis (strain 157F)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids.UniRule annotation

Catalytic activityi

L-alanine = D-alanine.UniRule annotationSAAS annotation

Cofactori

Note: Pyridoxal phosphate.UniRule annotationSAAS annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei63 – 631Proton acceptor; specific for D-alanineUniRule annotation
Binding sitei165 – 1651SubstrateUniRule annotation
Active sitei303 – 3031Proton acceptor; specific for L-alanineUniRule annotation
Binding sitei367 – 3671Substrate; via amide nitrogenUniRule annotation

GO - Molecular functioni

  1. alanine racemase activity Source: UniProtKB-HAMAP
  2. pyridoxal phosphate binding Source: UniProtKB-HAMAP

GO - Biological processi

  1. D-alanine biosynthetic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationSAAS annotation

Keywords - Ligandi

Pyridoxal phosphateUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciBLON565040:GHFW-494-MONOMER.
UniPathwayiUPA00042; UER00497.

Names & Taxonomyi

Protein namesi
Recommended name:
Alanine racemaseUniRule annotation (EC:5.1.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:BLIF_0479Imported
OrganismiBifidobacterium longum subsp. infantis (strain 157F)Imported
Taxonomic identifieri565040 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeBifidobacterialesBifidobacteriaceaeBifidobacterium
ProteomesiUP000008150: Chromosome

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei63 – 631N6-(pyridoxal phosphate)lysineUniRule annotation

Structurei

3D structure databases

ProteinModelPortaliE8MS79.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the alanine racemase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000031444.
KOiK01775.
OMAiLWQLEAI.

Family and domain databases

Gene3Di2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPiMF_01201. Ala_racemase.
InterProiIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamiPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSiPR00992. ALARACEMASE.
SMARTiSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMiSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsiTIGR00492. alr. 1 hit.
PROSITEiPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E8MS79-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSMNAAPEIA FSSEQGKANY AAARRQYPAQ AIVNLKTMRD NMAHLVSVVG
60 70 80 90 100
GPNSGTAVMG VVKADAYGHG LLPAALAALA GGATWLGTAQ SHEALLLRKL
110 120 130 140 150
GIGPDRCRIL TWVYNGTEVP FDELIAADID VSVGSLPGID AVAAAARKLG
160 170 180 190 200
KPARVHVKVD SGFGRNGFTP AGFDAALAKL VPLAKEGVLH IVGQWSHLAV
210 220 230 240 250
ADSPDVPEFV SSTDRQIETF KDFTRRMEQA GIPPEIRHLA NTAATLDRPE
260 270 280 290 300
IHFELTRPGI GLYGYEPDPA MGTPRDWHLT PAMRLQAQLG TVKDVEAGHG
310 320 330 340 350
ISYGRTYLTP DNTSTAIVPL GYADGIHRSA SGFDMEGAKH VEKPGGPVRI
360 370 380 390 400
MTTEGPKLYR VCGRVCMDQF IVDLHGSAAE LGVHEGDTVE LFGPGRGEDY
410 420 430 440 450
VEPTADDWAR AADTISYEIF TCLRNRIPRL YEHAAEVLPA ADLAKLDPAT

LL
Length:452
Mass (Da):48,328
Last modified:April 5, 2011 - v1
Checksum:i75C28E8031FDD596
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP010890 Genomic DNA. Translation: BAJ70623.1.
RefSeqiWP_015713381.1. NC_015052.1.
YP_004208401.1. NC_015052.1.

Genome annotation databases

EnsemblBacteriaiBAJ70623; BAJ70623; BLIF_0479.
GeneIDi10207170.
KEGGiblf:BLIF_0479.
PATRICi46884924. VBIBifLon182273_0492.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP010890 Genomic DNA. Translation: BAJ70623.1 .
RefSeqi WP_015713381.1. NC_015052.1.
YP_004208401.1. NC_015052.1.

3D structure databases

ProteinModelPortali E8MS79.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAJ70623 ; BAJ70623 ; BLIF_0479 .
GeneIDi 10207170.
KEGGi blf:BLIF_0479.
PATRICi 46884924. VBIBifLon182273_0492.

Phylogenomic databases

HOGENOMi HOG000031444.
KOi K01775.
OMAi LWQLEAI.

Enzyme and pathway databases

UniPathwayi UPA00042 ; UER00497 .
BioCyci BLON565040:GHFW-494-MONOMER.

Family and domain databases

Gene3Di 2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPi MF_01201. Ala_racemase.
InterProi IPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
IPR029066. PLP-binding_barrel.
[Graphical view ]
Pfami PF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view ]
PRINTSi PR00992. ALARACEMASE.
SMARTi SM01005. Ala_racemase_C. 1 hit.
[Graphical view ]
SUPFAMi SSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsi TIGR00492. alr. 1 hit.
PROSITEi PS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 157FImported.

Entry informationi

Entry nameiE8MS79_BIFL1
AccessioniPrimary (citable) accession number: E8MS79
Entry historyi
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: November 26, 2014
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3