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E8MJH7 (E8MJH7_BIFLS) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length500 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
E8MJH7 [UniParc].

Last modified April 5, 2011. Version 1.
Checksum: 9EC12622ECBE9A2B

FASTA50055,804
        10         20         30         40         50         60 
MFAERLRNAM NSRGLKQVDL VHAAEHRGVK MGKSHISQYV AGKTMPREDV LEFLASELDV 

        70         80         90        100        110        120 
DANWLRGEES SAPSNGDAAP EGAGPRTDDG TAPARRRTFG KSHKLDNVLY DVRGPVADEA 

       130        140        150        160        170        180 
MRMEANGTHI LKLNIGNPAP FGFRTPDEVV YDMAHQLTDT EGYSPSKGLF SARKAIMQYA 

       190        200        210        220        230        240 
QLKNIPNVTI DDIYTGNGVS ELINLSMSAL LDTGDEVLVP SPDYPLWTAC VNLAGGTAVH 

       250        260        270        280        290        300 
YLCDEQSEWY PDIDDIRSKI TSNTKAIVII NPNNPTGALY PKEVLQQIVD IARERRLIIF 

       310        320        330        340        350        360 
SDEIYDRLVM DGLQHVSIAS MAPDLFCVTF SGLSKSHMIA GYRIGWMILS GNKRIAKDYI 

       370        380        390        400        410        420 
EGLNMLANMR MCSNVPAQSV VQTALGGHQS VKDYLVPGGR VYDQRDLVYD MLNAIPGISA 

       430        440        450        460        470        480 
VKPKAAFYIF PKIDVKRFNI HSDEQFALDL LHEKHILISH GGAFNWRHPD HFRVVYLPRI 

       490        500 
GMLHETMEEL ADFFSYYRQN 

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References

[1]"Bifidobacteria can protect from enteropathogenic infection through production of acetate."
Fukuda S., Toh H., Hase K., Oshima K., Nakanishi Y., Yoshimura K., Tobe T., Clarke J.M., Topping D.L., Suzuki T., Taylor T.D., Itoh K., Kikuchi J., Morita H., Hattori M., Ohno H.
Nature 469:543-547(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12 [Tokyo].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP010889 Genomic DNA. Translation: BAJ68704.1.
RefSeqYP_005584874.1. NC_017219.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAJ68704; BAJ68704; BLIJ_1116.
GeneID12168037.
KEGGblon:BLIJ_1116.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK14260.
OMARIVFLPH.

Family and domain databases

Gene3D1.10.260.40. 1 hit.
3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR004839. Aminotransferase_I/II.
IPR001387. Cro/C1-type_HTH.
IPR010982. Lambda_DNA-bd_dom.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF00155. Aminotran_1_2. 1 hit.
PF01381. HTH_3. 1 hit.
[Graphical view]
SMARTSM00530. HTH_XRE. 1 hit.
[Graphical view]
SUPFAMSSF47413. SSF47413. 1 hit.
SSF53383. SSF53383. 1 hit.
PROSITEPS50943. HTH_CROC1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE8MJH7_BIFLS
AccessionPrimary (citable) accession number: E8MJH7
Entry history
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: October 16, 2013
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)