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E8MJ13 (E8MJ13_BIFL2) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length514 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
E8MJ13 [UniParc].

Last modified April 5, 2011. Version 1.
Checksum: B81E7825C2F4990D

FASTA51457,418
        10         20         30         40         50         60 
MFAERLRNAM NSRGLKQVDL VHAAEHRGVK MGKSHISQYV AGKTMPREDV LEFLASELDV 

        70         80         90        100        110        120 
DMNWLRGEES TTQLNSDASN SVTDGEHAAT PLATGASKPQ TDSEIPVGRR RTFGKSHKLD 

       130        140        150        160        170        180 
NVLYDVRGPV ADEAMRMEAN GTHILKLNIG NPAPFGFRTP DEVVYDMAHQ LTDTEGYSPS 

       190        200        210        220        230        240 
KGLFSARKAI MQYAQLKNIP NVTIDDIYTG NGVSELINLS MSALLDTGDE VLVPSPDYPL 

       250        260        270        280        290        300 
WTACVNLAGG TAVHYLCDEQ SEWYPDIDDI RSKITSNTKA IVIINPNNPT GALYPKEVLQ 

       310        320        330        340        350        360 
QIVDIAREHQ LIIFSDEIYD RLVMDGLQHI SIASMAPDLF CVTFSGLSKS HMIAGYRIGW 

       370        380        390        400        410        420 
MILSGNKRIA KDYIEGLNML ANMRMCSNVP AQSVVQTALG GHQSVNDYIV PGGRVHDQRD 

       430        440        450        460        470        480 
LVYDMLNQIP GITAVKPKAA FYIFPKIDVK RFNIHSDEQF ALDLLHDKHI LISHGGAFNW 

       490        500        510 
HRPDHFRVVY LPRMGMLRET MGEISDFFSY YWQS

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References

[1]"Bifidobacteria can protect from enteropathogenic infection through production of acetate."
Fukuda S., Toh H., Hase K., Oshima K., Nakanishi Y., Yoshimura K., Tobe T., Clarke J.M., Topping D.L., Suzuki T., Taylor T.D., Itoh K., Kikuchi J., Morita H., Hattori M., Ohno H.
Nature 469:543-547(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AP010888 Genomic DNA. Translation: BAJ66766.1.
RefSeqYP_004220858.1. NC_015067.1.

3D structure databases

ProteinModelPortalE8MJ13.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAJ66766; BAJ66766; BLLJ_1099.
GeneID10209862.
KEGGblm:BLLJ_1099.
PATRIC46890622. VBIBifLon48544_1144.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000223042.
KOK14260.
OMAYIEGIDM.

Enzyme and pathway databases

BioCycBLON565042:GIWN-1096-MONOMER.

Family and domain databases

Gene3D1.10.260.40. 1 hit.
3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR004839. Aminotransferase_I/II.
IPR001387. HTH.
IPR010982. Lambda_DNA-bd_dom.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF00155. Aminotran_1_2. 1 hit.
PF01381. HTH_3. 1 hit.
[Graphical view]
SMARTSM00530. HTH_XRE. 1 hit.
[Graphical view]
SUPFAMSSF47413. Lambda_like_DNA. 1 hit.
SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
PROSITEPS50943. HTH_CROC1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE8MJ13_BIFL2
AccessionPrimary (citable) accession number: E8MJ13
Entry history
Integrated into UniProtKB/TrEMBL: April 5, 2011
Last sequence update: April 5, 2011
Last modified: May 1, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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