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Protein
Submitted name:

Uncharacterized protein

Gene

si:dkey-276l13.3

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

HydrolaseUniRule annotation

Enzyme and pathway databases

ReactomeiR-DRE-936837. Ion transport by P-type ATPases.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:si:dkey-276l13.3Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 6

Organism-specific databases

ZFINiZDB-GENE-110407-7. si:dkey-276l13.3.

Subcellular locationi

  • Membrane UniRule annotation

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei467 – 48620HelicalUniRule annotationAdd
BLAST
Transmembranei506 – 52621HelicalUniRule annotationAdd
BLAST
Transmembranei547 – 56923HelicalUniRule annotationAdd
BLAST
Transmembranei575 – 59622HelicalUniRule annotationAdd
BLAST
Transmembranei739 – 76325HelicalUniRule annotationAdd
BLAST
Transmembranei783 – 80624HelicalUniRule annotationAdd
BLAST
Transmembranei1143 – 116523HelicalUniRule annotationAdd
BLAST
Transmembranei1171 – 119424HelicalUniRule annotationAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PaxDbiE7FDM8.

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000029666.

Structurei

3D structure databases

ProteinModelPortaliE7FDM8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini7 – 7367HMAInterPro annotationAdd
BLAST
Domaini89 – 15870HMAInterPro annotationAdd
BLAST
Domaini174 – 24067HMAInterPro annotationAdd
BLAST
Domaini302 – 36867HMAInterPro annotationAdd
BLAST
Domaini378 – 44467HMAInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily. [View classification]UniRule annotation
Contains 5 HMA domains.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixUniRule annotation

Phylogenomic databases

eggNOGiKOG0207. Eukaryota.
COG2217. LUCA.
GeneTreeiENSGT00530000063773.
InParanoidiE7FDM8.
TreeFamiTF300460.

Family and domain databases

Gene3Di2.70.150.10. 1 hit.
3.40.1110.10. 1 hit.
3.40.50.1000. 2 hits.
InterProiIPR023299. ATPase_P-typ_cyto_domN.
IPR018303. ATPase_P-typ_P_site.
IPR008250. ATPase_P-typ_transduc_dom_A.
IPR023214. HAD-like_dom.
IPR017969. Heavy-metal-associated_CS.
IPR006122. HMA_Cu_ion-bd.
IPR006121. HMA_dom.
IPR027256. P-typ_ATPase_IB.
IPR001757. P_typ_ATPase.
[Graphical view]
PfamiPF00122. E1-E2_ATPase. 1 hit.
PF00403. HMA. 5 hits.
[Graphical view]
SUPFAMiSSF55008. SSF55008. 5 hits.
SSF56784. SSF56784. 2 hits.
TIGRFAMsiTIGR01525. ATPase-IB_hvy. 1 hit.
TIGR01494. ATPase_P-type. 2 hits.
TIGR00003. TIGR00003. 5 hits.
PROSITEiPS00154. ATPASE_E1_E2. 1 hit.
PS01047. HMA_1. 4 hits.
PS50846. HMA_2. 5 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E7FDM8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
LPSEEGMVKI QVEGMTCQSC VRSIEEQIGR LEGVIGVQVS LSDKEAILRF
60 70 80 90 100
NPAKVTPEDM RKRIEDMGFD ALILALQGQI QPLSTDWSEV TLGVEGMHCG
110 120 130 140 150
SCVKNITETL SGMLGVNSVF VSLEKGSVDL RFDPSLLTLE TVKGFLEEIP
160 170 180 190 200
PGNFRVSIPG WSSRLNSAST PTQSVTIGIE GMTCNSCVQA IEGMMSQRAG
210 220 230 240 250
VCSIKVYLQE KKGIVTFDST VTCPEELRAE IEDMGFEAWL NQAMCSYSTD
260 270 280 290 300
ANAYSEICEV SSVSQMPSGL KHLPSQRHPS KPSPSPITKE NADGTGEREL
310 320 330 340 350
RKCFVHVTGM TCASCVSNIE RNLVKHEGIK SVLVALMAGK AEVKYDPGLL
360 370 380 390 400
DPAQIVQLIS HLGFGASVME EHSVQDGVLD LSVTGMTCAS CVHNIESKLL
410 420 430 440 450
RTKGIQEASV ALATNKAHVK FDSDLVGSRD IVRIIEGLGF GVSLIKNEGL
460 470 480 490 500
NNTLDHQEEI RQWKHSFLFS LVFGIPVMGL MIYMMVMDSQ HKEHGGSMPA
510 520 530 540 550
DQNILPGLSI INLAFFLLCT PVQFLGGRYF YIQAYRSLRH GVANMDVLIV
560 570 580 590 600
LATTIAYVYS FTVLIVAMIE GAKQSPLTFF DTPPMLFVFI ALGRWLEHVA
610 620 630 640 650
KSKTSEALAK LMSLQATDAT IVSLGPDNTI IREEQVSVDL VQRGDVVKVA
660 670 680 690 700
PGGKFPVDGK VIEGTSMADE SLITGEPMPV IKKAGSCVIA GSINAHGALL
710 720 730 740 750
VEATHVGSET TLSQIVKLVE EAQTSKAPIQ QLADKLSGYF VPFIVVISIL
760 770 780 790 800
TVTAWLIIGF LDFDVVSKNF PGYNQNISRT EVIVRFAFQA SITVLSIACP
810 820 830 840 850
CSLGLATPTA VMVGTGVGAQ NGILIKGGEP LEMAHKVGAV MFDKTGTITN
860 870 880 890 900
GVPQVTRVLV LWDRARLPLR TVLAVVGTAE ASSEHPLGMA VAKHCKEELG
910 920 930 940 950
AETLGFCHDF QAVPGCGISC KVSSVEDLLQ NSPKTQETKA SAVKQTPLLV
960 970 980 990 1000
TLQGVTTDSP SYSVLIGNRQ WMLRNGLEVT ADVDNAMSSH ETKGQTAILV
1010 1020 1030 1040 1050
AIDGVLCAMI AVADTVKAES ALAVHTLSSM GIEVYMITGD NRRTARAIAT
1060 1070 1080 1090 1100
QVGIRKVFAE VLPSHKVAKV QELQERGLKV AMVGDGVNDS PALAHADLGI
1110 1120 1130 1140 1150
AIGTGTDVAI EAADIVLIRN DLLDVVASIE LSKKTVQRIR INFVFALIYN
1160 1170 1180 1190 1200
LLGIPFAAGV FMPLGLVLQP WMGSAAMAAS SVSVVLSSLL LRLFKKTSVE
1210 1220
EYESRAQSHK LSLSPSQVST HVGLESR
Length:1,227
Mass (Da):131,745
Last modified:January 20, 2016 - v2
Checksum:i89DB77728E75E762
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX511272 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSDART00000030246; ENSDARP00000029666; ENSDARG00000058145.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX511272 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortaliE7FDM8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi7955.ENSDARP00000029666.

Proteomic databases

PaxDbiE7FDM8.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSDART00000030246; ENSDARP00000029666; ENSDARG00000058145.

Organism-specific databases

ZFINiZDB-GENE-110407-7. si:dkey-276l13.3.

Phylogenomic databases

eggNOGiKOG0207. Eukaryota.
COG2217. LUCA.
GeneTreeiENSGT00530000063773.
InParanoidiE7FDM8.
TreeFamiTF300460.

Enzyme and pathway databases

ReactomeiR-DRE-936837. Ion transport by P-type ATPases.

Family and domain databases

Gene3Di2.70.150.10. 1 hit.
3.40.1110.10. 1 hit.
3.40.50.1000. 2 hits.
InterProiIPR023299. ATPase_P-typ_cyto_domN.
IPR018303. ATPase_P-typ_P_site.
IPR008250. ATPase_P-typ_transduc_dom_A.
IPR023214. HAD-like_dom.
IPR017969. Heavy-metal-associated_CS.
IPR006122. HMA_Cu_ion-bd.
IPR006121. HMA_dom.
IPR027256. P-typ_ATPase_IB.
IPR001757. P_typ_ATPase.
[Graphical view]
PfamiPF00122. E1-E2_ATPase. 1 hit.
PF00403. HMA. 5 hits.
[Graphical view]
SUPFAMiSSF55008. SSF55008. 5 hits.
SSF56784. SSF56784. 2 hits.
TIGRFAMsiTIGR01525. ATPase-IB_hvy. 1 hit.
TIGR01494. ATPase_P-type. 2 hits.
TIGR00003. TIGR00003. 5 hits.
PROSITEiPS00154. ATPASE_E1_E2. 1 hit.
PS01047. HMA_1. 4 hits.
PS50846. HMA_2. 5 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: TuebingenImported.
  2. "The zebrafish reference genome sequence and its relationship to the human genome."
    Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J.
    , White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M., Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J., Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G., Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P., Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E., Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A., Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J., Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E., Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C., Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.
    Nature 496:498-503(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: TuebingenImported.

Entry informationi

Entry nameiE7FDM8_DANRE
AccessioniPrimary (citable) accession number: E7FDM8
Entry historyi
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: January 20, 2016
Last modified: May 11, 2016
This is version 44 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.