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E7FDM8 (E7FDM8_DANRE) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length1364 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the cation transport ATPase (P-type) family. RuleBase RU000653

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSDARP00000029666

Sequences

Sequence LengthMass (Da)Tools
E7FDM8 [UniParc].

Last modified March 8, 2011. Version 1.
Checksum: 809A2CE35E4AC2F6

FASTA1,364146,676
        10         20         30         40         50         60 
MNKLSPFSNL AKFISKSPDN GPVGGEQLCM KDCKPLCHCD PELCVCSLPQ NSKDGPTEYK 

        70         80         90        100        110        120 
ENGSQQEGWI PTKHAFDNFG YEPDGLKHNL VHQLPSEEGM VKIQVEGMTC QSCVRSIEEQ 

       130        140        150        160        170        180 
IGRLEGVIGV QVSLSDKEAI LRFNPAKVTP EDMRKRIEDM GFDALILALQ GQIQPLSTDW 

       190        200        210        220        230        240 
SEVTLGVEGM HCGSCVKNIT ETLSGMLGVN SVFVSLEKGS VDLRFDPSLL TLETVKGFLE 

       250        260        270        280        290        300 
EIPPGNFRVS IPGWSSRLNS ASTPTQSVTI GIEGMTCNSC VQAIEGMMSQ RAGVCSIKVY 

       310        320        330        340        350        360 
LQEKKGIVTF DSTVTCPEEL RAEIEDMGFE AWLNQDSEIC EVSSVSQMPS GLKHLPSQRH 

       370        380        390        400        410        420 
PSKPSPSPIT KENADGTGER ELRKCFVHVT GMTCASCVSN IERNLVKHEG IKSVLVALMA 

       430        440        450        460        470        480 
GKAEVKYDPG LLDPAQIVQL ISHLGFGASV MEEHSVQDGV LDLSVTGMTC ASCVHNIESK 

       490        500        510        520        530        540 
LLRTKGIQEA SVALATNKAH VKFDSDLVGS RDIVRIIEGL GFGVSLIKNE GLNNTLDHQE 

       550        560        570        580        590        600 
EIRQWKHSFL FSLVFGIPVM GLMIYMMVMD SQHKEHGGSM PADQNILPGL SIINLAFFLL 

       610        620        630        640        650        660 
CTPVQFLGGR YFYIQAYRSL RHGVANMDVL IVLATTIAYV YSFTVLIVAM IEGAKQSPLT 

       670        680        690        700        710        720 
FFDTPPMLFV FIALGRWLEH VAKSKTSEAL AKLMSLQATD ATIVSLGPDN TIIREEQVSV 

       730        740        750        760        770        780 
DLVQRGDVVK VAPGGKFPVD GKVIEGTSMA DESLITGEPM PVIKKAGSCV IAGSINAHGA 

       790        800        810        820        830        840 
LLVEATHVGS ETTLSQIVKL VEEAQTSKAP IQQLADKLSG YFVPFIVVIS ILTVTAWLII 

       850        860        870        880        890        900 
GFLDFDVVSK NFPGYNQNIS RTEVIVRFAF QASITVLSIA CPCSLGLATP TAVMVGTGVG 

       910        920        930        940        950        960 
AQNGILIKGG EPLEMAHKVG AVMFDKTGTI TNGVPQVTRV LVLWDRARLP LRTVLAVVGT 

       970        980        990       1000       1010       1020 
AEASSEHPLG MAVAKHCKEE LGAETLGFCH DFQAVPGCGI SCKVSSVEDL LQNSPKTQET 

      1030       1040       1050       1060       1070       1080 
KASAVKQTPL LVTLQGVTTD ESSLVADTDS GSDSPSYSVL IGNRQWMLRN GLEVTADVDN 

      1090       1100       1110       1120       1130       1140 
AMSSHETKGQ TAILVAIDGV LCAMIAVADT VKAESALAVH TLSSMGIEVY MITGDNRRTA 

      1150       1160       1170       1180       1190       1200 
RAIATQVGIR KVFAEVLPSH KVAKVQELQE RGLKVAMVGD GVNDSPALAH ADLGIAIGTG 

      1210       1220       1230       1240       1250       1260 
TDVAIEAADI VLIRNDLLDV VASIELSKKT VQRIRINFVF ALIYNLLGIP FAAGVFMPLG 

      1270       1280       1290       1300       1310       1320 
LVLQPWMGSA AMAASSVSVV LSSLLLRLFK KTSVEEYESR AQSHKLSLSP SQVSTHVGLE 

      1330       1340       1350       1360 
SRRCSPLSDR KRRSRSASGS SSFISGSFHP STTQPYNTSG RSIV 

« Hide

References

« Hide 'large scale' references
[1]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Tuebingen Ensembl ENSDARP00000029666.
[2]"The zebrafish reference genome sequence and its relationship to the human genome."
Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J. expand/collapse author list , White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M., Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J., Clee C., Oliver K., Clark R., Riddle C., Eliott D., Threadgold G., Harden G., Ware D., Mortimer B., Kerry G., Heath P., Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E., Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A., Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J., Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E., Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.
Nature 496:498-503(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Tuebingen Ensembl ENSDARP00000029666.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BX511272 Genomic DNA. No translation available.
RefSeqXP_684415.5. XM_679323.5.

3D structure databases

ProteinModelPortalE7FDM8.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSDART00000030246; ENSDARP00000029666; ENSDARG00000058145.
GeneID556499.
KEGGdre:556499.

Organism-specific databases

CTD540.
ZFINZDB-GENE-110407-7. si:dkey-276l13.3.

Phylogenomic databases

GeneTreeENSGT00730000111636.
KOK17686.
OMACASNIEN.
PhylomeDBE7FDM8.
TreeFamTF300460.

Family and domain databases

Gene3D2.70.150.10. 1 hit.
3.40.1110.10. 2 hits.
3.40.50.1000. 2 hits.
InterProIPR023299. ATPase_P-typ_cyto_domN.
IPR018303. ATPase_P-typ_P_site.
IPR008250. ATPase_P-typ_transduc_dom_A.
IPR027256. Cation_transp_P-typ_ATPase_IB.
IPR001757. Cation_transp_P_typ_ATPase.
IPR023214. HAD-like_dom.
IPR017969. Heavy-metal-associated_CS.
IPR006121. HeavyMe-assoc_HMA.
IPR006122. HMA_Cu_ion-bd.
[Graphical view]
PfamPF00122. E1-E2_ATPase. 1 hit.
PF00403. HMA. 5 hits.
PF00702. Hydrolase. 1 hit.
[Graphical view]
PRINTSPR00119. CATATPASE.
SUPFAMSSF55008. SSF55008. 5 hits.
SSF56784. SSF56784. 2 hits.
TIGRFAMsTIGR01525. ATPase-IB_hvy. 1 hit.
TIGR01494. ATPase_P-type. 2 hits.
TIGR00003. TIGR00003. 5 hits.
PROSITEPS00154. ATPASE_E1_E2. 1 hit.
PS01047. HMA_1. 4 hits.
PS50846. HMA_2. 5 hits.
[Graphical view]
ProtoNetSearch...

Other

PROE7FDM8.

Entry information

Entry nameE7FDM8_DANRE
AccessionPrimary (citable) accession number: E7FDM8
Entry history
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: July 9, 2014
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)