E7F9J8 (E7F9J8_DANRE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Nephrocystin-3 Ensembl ENSDARP00000101271

Gene names

Name:

nphp3 Ensembl ENSDARP00000101271 ZFIN ZDB-GENE-091204-117

Organism

Danio rerio (Zebrafish) (Brachydanio rerio) [Reference proteome] Ensembl ENSDARP00000101271

Taxonomic identifier

7955 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Actinopterygii › Actinopteri › Neopterygii › Teleostei › Elopocephala › Clupeocephala › Otocephala › Ostariophysi › Otophysi › Cypriniphysi › Cypriniformes › Cyprinoidea › Cyprinidae › Danio

Protein attributes

Sequence length	1302 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSDARP00000101271

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	Kupffer's vesicle development Inferred from mutant phenotype PubMed 22085962. Source: ZFIN convergent extension Inferred from mutant phenotype PubMed 20462968. Source: ZFIN heart jogging Inferred from mutant phenotype PubMed 20462968. Source: ZFIN left/right pattern formation Inferred from mutant phenotype PubMed 20462968. Source: ZFIN visual perception Inferred from mutant phenotype PubMed 22085962. Source: ZFIN
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E7F9J8 [UniParc]. Last modified March 8, 2011. Version 1. Checksum: EEEDFBD40D3101B4	FASTA	1,302	147,976
	10 20 30 40 50 60 MGTASSLVSP GEVIEDAYGG EGGEACEIPV EVKPKARLLR SSFRRGPRVI GASFKSTGSV 70 80 90 100 110 120 ELEYAAEYER LRKDYEIFRV SKNNEITSMQ KKEAKLDEEN KRLRAELQAL QKTYQKILRE 130 140 150 160 170 180 KESALEAKYQ AMERAATFEH DRDKVKRQFK IFRETKEKEI QDLLRAKRDL ESKLQQLQAQ 190 200 210 220 230 240 GIQIYDPADS DSDDNHTTVT TAGTQCEYWS GGVLGSEPSM GSMMQLQQTH RGPEFAHSLI 250 260 270 280 290 300 DVEGPFANVS RDDWDAAVAS LLQVSPHVSQ SLWSNTVRCY LIYTHETKAE LQTFIQTYSL 310 320 330 340 350 360 RLRRFCEGLG HFYLNVSFPE EKAAVFAAER RREMERSSVC VLLLKSSVSS CVVEDVEEAF 370 380 390 400 410 420 VKTPDARPLL LYLRTADRKG ENPATRDLLE RVNKADRSAK LKVVDHAGSV EEGAALIFSQ 430 440 450 460 470 480 LERIIKQELL GLELEENGVV EEREEEDSGD VLWDLHDEQE QIEAFQQACG AAARFSFQKY 490 500 510 520 530 540 VDRLNDMVAA PPPTPPLLVS GAPGSGKSLL LAKWIELQQK HSPNTLILYH FTGRPLSTST 550 560 570 580 590 600 DPVLIIKRLT VKLLQHFWSI SGLSMDPSKI LEEFPRWLER LSARHHGNII IIIDSIDQIQ 610 620 630 640 650 660 NAERHMKWLI DPLPANVRVL VSVNVETCPQ AWRLWPTLHL DPLNPREVKS VISTECVSVD 670 680 690 700 710 720 IKLSKDQEKK LEKHCRSAAT CNALYVSLLA RLITQVVNCG GTLDRTLQQC VMCQDTVSLY 730 740 750 760 770 780 RLGLKVALDS LNSDQEKHIM KELLCLVCAS HNGISESEVL ELFPDLTFPA LISMLHNLER 790 800 810 820 830 840 LLIITYACGL IRFQHSQACE GVNQEFLDGD KCRGSYREKC IRFFSQQLEQ DRVTWRVADE 850 860 870 880 890 900 LPWLLQQQED RSKLQMSLLN LFVSQNLYKR GHFSELLAYW QFVGKDKCSM ATEYFDALKE 910 920 930 940 950 960 FEKTCESEQS MSRLANLYET LGRFLKDLGL LSQAVAPLQR SLEIRETALD PDHPSVAQSL 970 980 990 1000 1010 1020 HQLAGVYVHW RKFGNAEQLY KQAMEICENA YGPEHSTVAR ELDSLSLLYQ KQNKYEQAEK 1030 1040 1050 1060 1070 1080 LRKRSVKIRQ KTARQKGHMY GFALLKRRAL QLEELTLGKD STDCAKTLNE LGVLYYLQNN 1090 1100 1110 1120 1130 1140 LDAAKLFLTR SLEMRQRVLG PDHPDCAQSL NNLAALHSER KEYESAEELY ERALDIRKRA 1150 1160 1170 1180 1190 1200 LAPDHPSLAY TLKHLAMLYK RRGKLEKAVP LYELALEIRE KSFGPKHPSV ATALVNLAVL 1210 1220 1230 1240 1250 1260 YCQLKQHSDA LPLYERALKV YEDSLGRLHP RVGETLKNLA VLSYEEGDFE KAAELYKRAM 1270 1280 1290 1300 EIKEAEPSLV CGKAPSRHSS SGDTFSMRSP ALPNASRPVV EH

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The genomic sequence of Danio rerio." The Danio rerio Sequencing Project at the Sanger Institute Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Tuebingen Ensembl ENSDARP00000101271.
[2]	Ensembl Submitted (JUL-2011) to UniProtKB Cited for: IDENTIFICATION. Strain: Tuebingen Ensembl ENSDARP00000101271.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BX470247 Genomic DNA. No translation available. CR381660 Genomic DNA. No translation available.
IPI	IPI00482537.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSDART00000110629; ENSDARP00000101271; ENSDARG00000078261.
Organism-specific databases
ZFIN	ZDB-GENE-091204-117. nphp3.
Phylogenomic databases
GeneTree	ENSGT00390000006393.
Gene expression databases
Bgee	E7F9J8.
Family and domain databases
Gene3D	1.25.40.10. 4 hits.
InterPro	IPR013026. TPR-contain_dom. IPR011990. TPR-like_helical. IPR019734. TPR_repeat. [Graphical view]
Pfam	PF13176. TPR_7. 1 hit. [Graphical view]
SMART	SM00028. TPR. 8 hits. [Graphical view]
PROSITE	PS50005. TPR. 8 hits. PS50293. TPR_REGION. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

E7F9J8_DANRE

Accession

Primary (citable) accession number: E7F9J8

Entry history

Integrated into UniProtKB/TrEMBL:	March 8, 2011
Last sequence update:	March 8, 2011
Last modified:	March 6, 2013
This is version 18 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)