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E7F4J0 (E7F4J0_DANRE) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length532 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSDARP00000065011

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
E7F4J0 [UniParc].

Last modified March 8, 2011. Version 1.
Checksum: D4645BBC99CBB911

FASTA53259,860
        10         20         30         40         50         60 
MLREISAAQG MKRCVSYRNM AAPPVSWPIP MKAIGAQNLL TMPGGVNASG YLHKKGGSQF 

        70         80         90        100        110        120 
SLMKWPLRFI IIHKGCVYYF KSSTSAAPQG TFSLNGYNRV LRAAEETTSS NVFPFKIVHF 

       130        140        150        160        170        180 
SKRHRTWYFS AASEDERKEW MRHLRREINY YNDKKDIPLP SDDLDAESLY GQLEETVEIR 

       190        200        210        220        230        240 
PVEEDPEEDY MLQDEDSEEE DGSPTSAGRP TVPPPSYPPP PVPFQSSRET RSKGPPPPLP 

       250        260        270        280        290        300 
PPFKKPSCHI KDTPPPPLPY APHLEKTDSN RRPVSPMPPL PPPVSLKPPP GPFSTMPACE 

       310        320        330        340        350        360 
KKSSVTFNHS PATLPIVENL QKVMLISASK TSISGHHLEV KPSFGQRPLS PHLSTNHSTL 

       370        380        390        400        410        420 
GQINKPPVPN KPKPGRPSFQ RASPDGQSFR SSIEEKPPKR IPDRIDESSD EEDYENVQLP 

       430        440        450        460        470        480 
PSVFVNTMET CNVERLFRDT YNQPQNGLYC IRKSLTGKTS QVLVVWDSGI NKARNYRLFE 

       490        500        510        520        530 
EEQRIYLETD VTFTSLAALV EHYHSHPLPS SNNSMPNYSL CLHLPFGYTP PR 

« Hide

References

« Hide 'large scale' references
[1]Ensembl
Submitted (APR-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Tuebingen Ensembl ENSDARP00000065011.
[2]"The zebrafish reference genome sequence and its relationship to the human genome."
Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J. expand/collapse author list , White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M., Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J., Clee C., Oliver K., Clark R., Riddle C., Eliott D., Threadgold G., Harden G., Ware D., Mortimer B., Kerry G., Heath P., Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E., Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A., Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J., Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E., Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.
Nature 496:498-503(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Tuebingen Ensembl ENSDARP00000065011.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CR628386 Genomic DNA. No translation available.
RefSeqXP_005155640.1. XM_005155583.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSDART00000065012; ENSDARP00000065011; ENSDARG00000021982.
GeneID101886051.
KEGGdre:101886051.

Organism-specific databases

ZFINZDB-GENE-091204-268. sh3bp2.

Phylogenomic databases

GeneTreeENSGT00390000002216.
KOK07984.
OMANEDYEHE.
TreeFamTF333342.

Family and domain databases

Gene3D2.30.29.30. 1 hit.
3.30.505.10. 1 hit.
InterProIPR011993. PH_like_dom.
IPR001849. Pleckstrin_homology.
IPR000980. SH2.
[Graphical view]
PfamPF00169. PH. 1 hit.
PF00017. SH2. 1 hit.
[Graphical view]
SMARTSM00233. PH. 1 hit.
SM00252. SH2. 1 hit.
[Graphical view]
PROSITEPS50003. PH_DOMAIN. 1 hit.
PS50001. SH2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE7F4J0_DANRE
AccessionPrimary (citable) accession number: E7F4J0
Entry history
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: March 19, 2014
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)