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Protein
Submitted name:

Uncharacterized protein

Gene

sh3bp2

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:sh3bp2Imported
Synonyms:si:ch211-241o7.3Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
ProteomesiUP000000437: Chromosome 10

Organism-specific databases

ZFINiZDB-GENE-091204-268. sh3bp2.

PTM / Processingi

Keywords - PTMi

PhosphoproteinSAAS annotation

Family & Domainsi

Sequence similaritiesi

Contains PH domain.SAAS annotation

Keywords - Domaini

SH2 domainSAAS annotation

Phylogenomic databases

GeneTreeiENSGT00390000002216.
InParanoidiE7F4J0.
KOiK07984.
OMAiSNVFPFK.
PhylomeDBiE7F4J0.
TreeFamiTF333342.

Family and domain databases

Gene3Di2.30.29.30. 1 hit.
3.30.505.10. 1 hit.
InterProiIPR001849. PH_domain.
IPR011993. PH_like_dom.
IPR000980. SH2.
[Graphical view]
PfamiPF00169. PH. 1 hit.
PF00017. SH2. 1 hit.
[Graphical view]
SMARTiSM00233. PH. 1 hit.
SM00252. SH2. 1 hit.
[Graphical view]
SUPFAMiSSF55550. SSF55550. 1 hit.
PROSITEiPS50003. PH_DOMAIN. 1 hit.
PS50001. SH2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E7F4J0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLREISAAQG MKRCVSYRNM AAPPVSWPIP MKAIGAQNLL TMPGGVNASG
60 70 80 90 100
YLHKKGGSQF SLMKWPLRFI IIHKGCVYYF KSSTSAAPQG TFSLNGYNRV
110 120 130 140 150
LRAAEETTSS NVFPFKIVHF SKRHRTWYFS AASEDERKEW MRHLRREINY
160 170 180 190 200
YNDKKDIPLP SDDLDAESLY GQLEETVEIR PVEEDPEEDY MLQDEDSEEE
210 220 230 240 250
DGSPTSAGRP TVPPPSYPPP PVPFQSSRET RSKGPPPPLP PPFKKPSCHI
260 270 280 290 300
KDTPPPPLPY APHLEKTDSN RRPVSPMPPL PPPVSLKPPP GPFSTMPACE
310 320 330 340 350
KKSSVTFNHS PATLPIVENL QKVMLISASK TSISGHHLEV KPSFGQRPLS
360 370 380 390 400
PHLSTNHSTL GQINKPPVPN KPKPGRPSFQ RASPDGQSFR SSIEEKPPKR
410 420 430 440 450
IPDRIDESSD EEDYENVQLP PSVFVNTMET CNVERLFRDT YNQPQNGLYC
460 470 480 490 500
IRKSLTGKTS QVLVVWDSGI NKARNYRLFE EEQRIYLETD VTFTSLAALV
510 520 530
EHYHSHPLPS SNNSMPNYSL CLHLPFGYTP PR
Length:532
Mass (Da):59,860
Last modified:March 8, 2011 - v1
Checksum:iD4645BBC99CBB911
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR628386 Genomic DNA. No translation available.
RefSeqiXP_005155640.1. XM_005155583.2.

Genome annotation databases

EnsembliENSDART00000065012; ENSDARP00000065011; ENSDARG00000021982.
GeneIDi101886051.
KEGGidre:101886051.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR628386 Genomic DNA. No translation available.
RefSeqiXP_005155640.1. XM_005155583.2.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSDART00000065012; ENSDARP00000065011; ENSDARG00000021982.
GeneIDi101886051.
KEGGidre:101886051.

Organism-specific databases

CTDi6452.
ZFINiZDB-GENE-091204-268. sh3bp2.

Phylogenomic databases

GeneTreeiENSGT00390000002216.
InParanoidiE7F4J0.
KOiK07984.
OMAiSNVFPFK.
PhylomeDBiE7F4J0.
TreeFamiTF333342.

Family and domain databases

Gene3Di2.30.29.30. 1 hit.
3.30.505.10. 1 hit.
InterProiIPR001849. PH_domain.
IPR011993. PH_like_dom.
IPR000980. SH2.
[Graphical view]
PfamiPF00169. PH. 1 hit.
PF00017. SH2. 1 hit.
[Graphical view]
SMARTiSM00233. PH. 1 hit.
SM00252. SH2. 1 hit.
[Graphical view]
SUPFAMiSSF55550. SSF55550. 1 hit.
PROSITEiPS50003. PH_DOMAIN. 1 hit.
PS50001. SH2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Ensembl
    Submitted (APR-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: TuebingenImported.
  2. "The zebrafish reference genome sequence and its relationship to the human genome."
    Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J.
    , White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M., Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J., Clee C., Oliver K., Clark R., Riddle C., Eliott D., Threadgold G., Harden G., Ware D., Mortimer B., Kerry G., Heath P., Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E., Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A., Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J., Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E., Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.
    Nature 496:498-503(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: TuebingenImported.

Entry informationi

Entry nameiE7F4J0_DANRE
AccessioniPrimary (citable) accession number: E7F4J0
Entry historyi
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: February 4, 2015
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.