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E7F3E6 (E7F3E6_DANRE) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length1036 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSDARP00000056535

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular_componentribonucleoprotein complex

Inferred from electronic annotation. Source: InterPro

   Molecular_functionRNA binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
E7F3E6 [UniParc].

Last modified March 8, 2011. Version 1.
Checksum: 60FB0D77B379E076

FASTA1,036119,353
        10         20         30         40         50         60 
MKAPALLQSD LKVNTDIRLQ QICHSPRLEN RILAQAASAL SHHQYAAPSW ASQTHISSAC 

        70         80         90        100        110        120 
PALQPTSLSL TRSSSSLLSS TTMSSISSDS SLLSTKNTLL IEPRLHLPAS SSLTSTCSQN 

       130        140        150        160        170        180 
PLLYCSKMST ASIIPNICSY PSTSAEDKVS SHEKREEEGI LLSTEGLLGN REEPKQDALR 

       190        200        210        220        230        240 
MSSQESLDGD DQMLSSEAAV LDMDVDGVGE QTVALREEFG DLEVSKEEKL AELKDRKNNL 

       250        260        270        280        290        300 
LNMVCCSLIQ KGCAPGQKDW DNKKSVWSII KKLATEITTE DPEFVLKVAV YTRQELNIRI 

       310        320        330        340        350        360 
TANYLLALAA HLPASKQHLR RYFCPAVQLP SDWLEVARLY SMCFSKSLPS CLKKALVDKF 

       370        380        390        400        410        420 
KQFSEYQLAK YNTRKHRCKH NKNQKKGKNI SPEEWKKWGE LLRVDEPILR KYLDSQKHTK 

       430        440        450        460        470        480 
KDKKESEFSL KKMVMRLHIK ESAEHVMAIL GKKYPSDLKA FSRSGLSGVW DRERAGKQMK 

       490        500        510        520        530        540 
LKQPDTWERK VSQEGNKAAT WEKLIDGKSL PFMAMLRNLR NMITVGISEK HHSKILNRLS 

       550        560        570        580        590        600 
SKNAVIQSRQ FPFRFLSAYK VILELFKFAR GAAVKTKSST DIIRDILKKL PKTRRYNRNC 

       610        620        630        640        650        660 
LDWDKAERKK LRVTLRVPFV YRLFNVKRSL MIKANRRLYT QELLKKYCCA LEKSVQISCK 

       670        680        690        700        710        720 
YNIPPLPGRT LFIFNIMSGM DENWTNEEFC LPPEITDNLD ENQLSAKPLE TALLLCMMMK 

       730        740        750        760        770        780 
YCSEDSQVFF ICYQDLYEVK LRSDVLLDNV RQAIELSKEI REDYDKYEHI CSSAFFTKLT 

       790        800        810        820        830        840 
VERIKVDRIV LFERYYDDDS LMMEISNYRQ DVHRDTVVMD LQISRPSRTE FKEDSSTVQI 

       850        860        870        880        890        900 
WGFSEQILKF VSERGSSRML QHVENMDRVY NIPPPQGCQK EPERSADVMP LQATPKFRWK 

       910        920        930        940        950        960 
GVRVFISSTF RDMHAERDVL VRSVFPELRR RAAPHYLYLQ ELELRWGVTE EESNRAAELC 

       970        980        990       1000       1010       1020 
LSEVCRSQLL LGILGERYGL VPPRPILPDL PQYNWLKSAS DGLSITEMEI RQFQALHPDS 

      1030 
AQSRMFFYFR SPHLAR 

« Hide

References

« Hide 'large scale' references
[1]"The genomic sequence of Danio rerio."
The Danio rerio Sequencing Project at the Sanger Institute
Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: AB Ensembl ENSDARP00000056535.
[2]Ensembl
Submitted (APR-2011) to UniProtKB
Cited for: IDENTIFICATION.
[3]"The zebrafish reference genome sequence and its relationship to the human genome."
Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J. expand/collapse author list , White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M., Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J., Clee C., Oliver K., Clark R., Riddle C., Eliott D., Threadgold G., Harden G., Ware D., Mortimer B., Kerry G., Heath P., Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E., Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A., Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J., Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E., Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.
Nature 496:498-503(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Tuebingen.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AL954692 Genomic DNA. No translation available.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSDART00000056536; ENSDARP00000056535; ENSDARG00000038713.

Organism-specific databases

ZFINZDB-GENE-070912-283. si:ch211-284o19.1.

Phylogenomic databases

GeneTreeENSGT00750000117706.

Family and domain databases

InterProIPR025139. DUF4062.
IPR008858. TROVE.
[Graphical view]
PfamPF13271. DUF4062. 1 hit.
PF05731. TROVE. 1 hit.
[Graphical view]
PROSITEPS50988. TROVE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE7F3E6_DANRE
AccessionPrimary (citable) accession number: E7F3E6
Entry history
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: April 16, 2014
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)