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E7F3E6

- E7F3E6_DANRE

UniProt

E7F3E6 - E7F3E6_DANRE

Protein
Submitted name:

Uncharacterized protein

Gene

si:ch211-284o19.1

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 28 (01 Oct 2014)
      Sequence version 1 (08 Mar 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. RNA binding Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Name:si:ch211-284o19.1Imported
    Synonyms:OTTDARG00000025100Imported
    OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
    Taxonomic identifieri7955 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
    ProteomesiUP000000437: Chromosome 2

    Organism-specific databases

    ZFINiZDB-GENE-070912-283. si:ch211-284o19.1.

    Subcellular locationi

    GO - Cellular componenti

    1. ribonucleoprotein complex Source: InterPro

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00750000117706.
    OMAiEHICSSA.

    Family and domain databases

    InterProiIPR025139. DUF4062.
    IPR008858. TROVE.
    [Graphical view]
    PfamiPF13271. DUF4062. 1 hit.
    PF05731. TROVE. 1 hit.
    [Graphical view]
    PROSITEiPS50988. TROVE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E7F3E6-1 [UniParc]FASTAAdd to Basket

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    MKAPALLQSD LKVNTDIRLQ QICHSPRLEN RILAQAASAL SHHQYAAPSW     50
    ASQTHISSAC PALQPTSLSL TRSSSSLLSS TTMSSISSDS SLLSTKNTLL 100
    IEPRLHLPAS SSLTSTCSQN PLLYCSKMST ASIIPNICSY PSTSAEDKVS 150
    SHEKREEEGI LLSTEGLLGN REEPKQDALR MSSQESLDGD DQMLSSEAAV 200
    LDMDVDGVGE QTVALREEFG DLEVSKEEKL AELKDRKNNL LNMVCCSLIQ 250
    KGCAPGQKDW DNKKSVWSII KKLATEITTE DPEFVLKVAV YTRQELNIRI 300
    TANYLLALAA HLPASKQHLR RYFCPAVQLP SDWLEVARLY SMCFSKSLPS 350
    CLKKALVDKF KQFSEYQLAK YNTRKHRCKH NKNQKKGKNI SPEEWKKWGE 400
    LLRVDEPILR KYLDSQKHTK KDKKESEFSL KKMVMRLHIK ESAEHVMAIL 450
    GKKYPSDLKA FSRSGLSGVW DRERAGKQMK LKQPDTWERK VSQEGNKAAT 500
    WEKLIDGKSL PFMAMLRNLR NMITVGISEK HHSKILNRLS SKNAVIQSRQ 550
    FPFRFLSAYK VILELFKFAR GAAVKTKSST DIIRDILKKL PKTRRYNRNC 600
    LDWDKAERKK LRVTLRVPFV YRLFNVKRSL MIKANRRLYT QELLKKYCCA 650
    LEKSVQISCK YNIPPLPGRT LFIFNIMSGM DENWTNEEFC LPPEITDNLD 700
    ENQLSAKPLE TALLLCMMMK YCSEDSQVFF ICYQDLYEVK LRSDVLLDNV 750
    RQAIELSKEI REDYDKYEHI CSSAFFTKLT VERIKVDRIV LFERYYDDDS 800
    LMMEISNYRQ DVHRDTVVMD LQISRPSRTE FKEDSSTVQI WGFSEQILKF 850
    VSERGSSRML QHVENMDRVY NIPPPQGCQK EPERSADVMP LQATPKFRWK 900
    GVRVFISSTF RDMHAERDVL VRSVFPELRR RAAPHYLYLQ ELELRWGVTE 950
    EESNRAAELC LSEVCRSQLL LGILGERYGL VPPRPILPDL PQYNWLKSAS 1000
    DGLSITEMEI RQFQALHPDS AQSRMFFYFR SPHLAR 1036
    Length:1,036
    Mass (Da):119,353
    Last modified:March 8, 2011 - v1
    Checksum:i60FB0D77B379E076
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL954692 Genomic DNA. No translation available.

    Genome annotation databases

    EnsembliENSDART00000056536; ENSDARP00000056535; ENSDARG00000038713.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL954692 Genomic DNA. No translation available.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSDART00000056536 ; ENSDARP00000056535 ; ENSDARG00000038713 .

    Organism-specific databases

    ZFINi ZDB-GENE-070912-283. si:ch211-284o19.1.

    Phylogenomic databases

    GeneTreei ENSGT00750000117706.
    OMAi EHICSSA.

    Family and domain databases

    InterProi IPR025139. DUF4062.
    IPR008858. TROVE.
    [Graphical view ]
    Pfami PF13271. DUF4062. 1 hit.
    PF05731. TROVE. 1 hit.
    [Graphical view ]
    PROSITEi PS50988. TROVE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The genomic sequence of Danio rerio."
      The Danio rerio Sequencing Project at the Sanger Institute
      Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ABImported.
    2. Ensembl
      Submitted (APR-2011) to UniProtKB
      Cited for: IDENTIFICATION.
    3. "The zebrafish reference genome sequence and its relationship to the human genome."
      Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J.
      , White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M., Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J., Clee C., Oliver K., Clark R., Riddle C., Eliott D., Threadgold G., Harden G., Ware D., Mortimer B., Kerry G., Heath P., Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E., Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A., Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J., Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E., Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.
      Nature 496:498-503(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: TuebingenImported.

    Entry informationi

    Entry nameiE7F3E6_DANRE
    AccessioniPrimary (citable) accession number: E7F3E6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 8, 2011
    Last sequence update: March 8, 2011
    Last modified: October 1, 2014
    This is version 28 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3