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E7EXP8 (E7EXP8_DANRE) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length662 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSDARP00000111989

Ontologies

Sequences

Sequence LengthMass (Da)Tools
E7EXP8 [UniParc].

Last modified March 8, 2011. Version 1.
Checksum: ED2192CFFEBBF818

FASTA66275,870
        10         20         30         40         50         60 
MSHRKSDGST YDQSLLIPES RFNTVLQLDQ SSGKSASSIN LSRLDSPEDE RRTVVLSTQS 

        70         80         90        100        110        120 
EAARKRGTQQ LIPKSLAVTS RPKNRHHTTV VTLPVPLQAS EIGWEDYDSD AGDGVSLRRN 

       130        140        150        160        170        180 
RRNKSYRAAI TSLHLDGELQ PESLSPVSDE KVVSPKQANK SGRKRTLGRI RNRKHAGSFK 

       190        200        210        220        230        240 
DEPRFYQEIK ERGLNVSSLS TEEEELSPVG PPGEDQGIVV KNYRAAYITW SQLPQVKDLG 

       250        260        270        280        290        300 
ILDFITPEER KRQEVIFEII TSEYSYQHSL SILVRHFKDS VDLRKTMTAT EHHHLFSNIS 

       310        320        330        340        350        360 
VIQDVSKRFF EDLDKRHQAN PVIERISDIV ATYATKHFEP YIVYCSNETF QQRTLQKLLS 

       370        380        390        400        410        420 
SNSAFRETLK QIETSEDCGG LPMLSFLILP MQRVTRLPLL MDTICEKTTK ETAEYYKACW 

       430        440        450        460        470        480 
AFKAISKLVK SCNDGARRME RTEQMYTIQK QMEFGKIKPF PLVSSSRWLK KSGELAVYTD 

       490        500        510        520        530        540 
DLSIFRKAFS FKSYYLFLFN DVLIVTKKKS EESYVVLDYA TVEKVEVEEE MSDSKLNLKL 

       550        560        570        580        590        600 
MMNPNSDGRS EQLVLVAENK LVRAQWVTAL RDVKQTSSID NDDLPQYEAT KAYLPKAPDE 

       610        620        630        640        650        660 
LSLQQAEVVI VIQEVEGWCY GERMRDGERG WFPASCATQI TNRTAMENNI QRMERLRKET 


NV 

« Hide

References

« Hide 'large scale' references
[1]Ensembl
Submitted (APR-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Tuebingen Ensembl ENSDARP00000111989.
[2]"The zebrafish reference genome sequence and its relationship to the human genome."
Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J. expand/collapse author list , White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M., Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J., Clee C., Oliver K., Clark R., Riddle C., Eliott D., Threadgold G., Harden G., Ware D., Mortimer B., Kerry G., Heath P., Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E., Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A., Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J., Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E., Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.
Nature 496:498-503(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Tuebingen Ensembl ENSDARP00000111989.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BX000472 Genomic DNA. No translation available.
CR792439 Genomic DNA. No translation available.
CT573138 Genomic DNA. No translation available.
RefSeqXP_005167338.1. XM_005167281.1.
UniGeneDr.78159.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSDART00000131137; ENSDARP00000111989; ENSDARG00000077114.
GeneID567180.
KEGGdre:567180.

Organism-specific databases

CTD27237.
ZFINZDB-GENE-081104-446. arhgef16.

Phylogenomic databases

GeneTreeENSGT00550000074493.
OMAANCAKEI.
TreeFamTF316357.

Family and domain databases

Gene3D1.20.900.10. 1 hit.
2.30.29.30. 1 hit.
InterProIPR000219. DH-domain.
IPR011993. PH_like_dom.
IPR001849. Pleckstrin_homology.
IPR001452. SH3_domain.
[Graphical view]
PfamPF00169. PH. 1 hit.
PF00621. RhoGEF. 1 hit.
[Graphical view]
SMARTSM00233. PH. 1 hit.
SM00325. RhoGEF. 1 hit.
SM00326. SH3. 1 hit.
[Graphical view]
SUPFAMSSF48065. SSF48065. 1 hit.
SSF50044. SSF50044. 1 hit.
PROSITEPS50010. DH_2. 1 hit.
PS50003. PH_DOMAIN. 1 hit.
PS50002. SH3. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

PROE7EXP8.

Entry information

Entry nameE7EXP8_DANRE
AccessionPrimary (citable) accession number: E7EXP8
Entry history
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: April 16, 2014
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)