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Protein
Submitted name:

Lymphocyte-specific protein 1

Gene

LSP1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Lymphocyte-specific protein 1Imported
Gene namesi
Name:LSP1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640 Componenti: Chromosome 11

Organism-specific databases

HGNCiHGNC:6707. LSP1.

PTM / Processingi

Proteomic databases

PRIDEiE7EMG9.

Expressioni

Gene expression databases

BgeeiE7EMG9.
ExpressionAtlasiE7EMG9. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000308383.

Structurei

3D structure databases

ProteinModelPortaliE7EMG9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00730000111324.

Family and domain databases

InterProiIPR006018. Caldesmon_LSP.
IPR002211. Lymphspecific.
[Graphical view]
PANTHERiPTHR18949. PTHR18949. 1 hit.
PfamiPF02029. Caldesmon. 1 hit.
[Graphical view]
PRINTSiPR01083. LYMPHSPCIFIC.

Sequencei

Sequence statusi: Fragment.

E7EMG9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLEERSEARP TAQWSVEDEE EAVHEQCQHE RDRQLQAQDE EGGGHVPERP
60 70 80 90 100
KQEMLLSLKP SEAPELDEDE GFGDWSQRPE QRQQHEGAQG ALDSGEPPQC
110 120 130 140 150
RSPEGEQEDR PGLHAYEKED SDEVHLEELS LSKEGPGPED TVQDNLGAAG
160 170 180 190 200
AEEEQEEHQK CQQPRTPSPL VLEGTIEQSS PPLSPTTKLI DRTESLNRSI
210 220 230 240 250
EKSNSVKKSQ PDLPISKIDQ WLEQYTQAIE TAGRTPKLAR QASIELPSMA
260 270
VASTKSRWET GEVQAQSAAK TPSCK
Length:275
Mass (Da):30,613
Last modified:March 8, 2011 - v1
Checksum:i076A4612F8B0B078
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei275 – 2751Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC051649 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENST00000457279; ENSP00000400346; ENSG00000130592.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC051649 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortaliE7EMG9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000308383.

Proteomic databases

PRIDEiE7EMG9.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000457279; ENSP00000400346; ENSG00000130592.

Organism-specific databases

HGNCiHGNC:6707. LSP1.
GenAtlasiSearch...

Phylogenomic databases

GeneTreeiENSGT00730000111324.

Miscellaneous databases

ChiTaRSiLSP1. human.
NextBioi35499462.

Gene expression databases

BgeeiE7EMG9.
ExpressionAtlasiE7EMG9. baseline and differential.

Family and domain databases

InterProiIPR006018. Caldesmon_LSP.
IPR002211. Lymphspecific.
[Graphical view]
PANTHERiPTHR18949. PTHR18949. 1 hit.
PfamiPF02029. Caldesmon. 1 hit.
[Graphical view]
PRINTSiPR01083. LYMPHSPCIFIC.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. "Phosphorylation analysis of primary human T lymphocytes using sequential IMAC and titanium oxide enrichment."
    Carrascal M., Ovelleiro D., Casas V., Gay M., Abian J.
    J. Proteome Res. 7:5167-5176(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  3. "Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions."
    Mayya V., Lundgren D.H., Hwang S.I., Rezaul K., Wu L., Eng J.K., Rodionov V., Han D.K.
    Sci. Signal. 2:ra46-RA46(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  4. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.
  5. "An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome."
    Bian Y., Song C., Cheng K., Dong M., Wang F., Huang J., Sun D., Wang L., Ye M., Zou H.
    J. Proteomics 96:253-262(2014) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].

Entry informationi

Entry nameiE7EMG9_HUMAN
AccessioniPrimary (citable) accession number: E7EMG9
Entry historyi
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: June 24, 2015
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.