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E7D8R1

- E7D8R1_CLOPF

UniProt

E7D8R1 - E7D8R1_CLOPF

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Protein
Submitted name: Epsilon-toxin
Gene
etx
Organism
Clostridium perfringens D
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei93 – 931PhosphateImported
Binding sitei233 – 2331PhosphateImported

Names & Taxonomyi

Protein namesi
Submitted name:
Epsilon-toxinImported
Gene namesi
Name:etxImported
OrganismiClostridium perfringens DImported
Taxonomic identifieri107819 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3232 PredictedImported
Add
BLAST
Chaini33 – 334302 PredictedImported
PRO_5000920962Add
BLAST
Chaini46 – 328283epsilon toxinImported
PRO_5000692029Add
BLAST

Interactioni

Protein-protein interaction databases

MINTiMINT-8199207.

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3ZJXX-ray2.40A/B/C/D47-328[»]

Family & Domainsi

Keywords - Domaini

SignalImported

Family and domain databases

Gene3Di2.170.15.10. 2 hits.
InterProiIPR023307. Aerolysin-like_beta_cmplx_dom.
IPR009209. Epsilon_toxin.
IPR004991. ETX_MTX2.
[Graphical view]
PfamiPF03318. ETX_MTX2. 1 hit.
[Graphical view]
PIRSFiPIRSF026587. Epsilon_toxin. 1 hit.

Sequencei

Sequence statusi: Fragment.

E7D8R1-1 [UniParc]FASTAAdd to Basket

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MKKNLVKSLA IASAVISIYS IVNIVSPTNV IAKEISNTVS NEMSKKASYD    50
NVDTLIEKGR YNTKYNYLKR MEKYYPNAMA YFDKVTINPQ GNDFYINNPK 100
VELDGEPSMN YLEDVYVGKA LLTNDTQQEQ KLKSQSFTCK NTDTVTATTT 150
HTVGTSIQAT AKFTVPFNET GVSLTTSYSF ANTNTNTNSK EITHNVPSQD 200
ILVPANTTVE VIAYLKKVNV KGNVKLVGQV SGSEWGEIPS YLAFPRDGYK 250
FSLSDTVNKS DLNEDGTINI NGKGNYSAVM GDELIVKVRN LNTNNVQEYV 300
IPVDKKEKSN DSNIVKYRSL SIKAPGIKAE AAAK 334
Length:334
Mass (Da):36,862
Last modified:March 8, 2011 - v1
Checksum:i8C80F71E3E30B0B6
GO

Non-terminal residue

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei334 – 3341Imported

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
HQ179546 Genomic DNA. Translation: ADU04573.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
HQ179546 Genomic DNA. Translation: ADU04573.1 .

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
3ZJX X-ray 2.40 A/B/C/D 47-328 [» ]
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

MINTi MINT-8199207.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Family and domain databases

Gene3Di 2.170.15.10. 2 hits.
InterProi IPR023307. Aerolysin-like_beta_cmplx_dom.
IPR009209. Epsilon_toxin.
IPR004991. ETX_MTX2.
[Graphical view ]
Pfami PF03318. ETX_MTX2. 1 hit.
[Graphical view ]
PIRSFi PIRSF026587. Epsilon_toxin. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Fusion of Clostridium perfringens type D and B epsilon and beta toxin genes and it's cloning in E. coli."
    Pilehchian Langroudi R., Aghaei Pour K., Shamsara M., Ghorashi S.A.
    Arch Razi Inst 66:1-10(2011)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: CWD CN 409Imported.
  2. "In silico fusion of epsilon and beta toxin genes of Clostridium perfringens types D and B."
    Pilehchian Langroudi R., Aghaei Pour K., Shamsara M., Ghorashi S.A.
    Iran. J. Biotechnol. 10:54-60(2012)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: CWD CN 409Imported.
  3. "Clostridium perfringens epsilon toxin H149A mutant as a platform for receptor binding studies."
    Bokori-Brown M., Kokkinidou M.C., Savva C.G., Fernandes da Costa S., Naylor C.E., Cole A.R., Moss D.S., Basak A.K., Titball R.W.
    Protein Sci. 22:650-659(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.40 ANGSTROMS) OF 47-328 IN COMPLEX WITH PHOSPHATE.

Entry informationi

Entry nameiE7D8R1_CLOPF
AccessioniPrimary (citable) accession number: E7D8R1
Entry historyi
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: June 11, 2014
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported

External Data

Dasty 3

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