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E7D8R1 (E7D8R1_CLOPF) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Name:etx EMBL ADU04573.1
OrganismClostridium perfringens D EMBL ADU04573.1
Taxonomic identifier107819 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium

Protein attributes

Sequence length334 AA.
Sequence statusFragment.
Protein existenceEvidence at protein level

Ontologies

Keywords
   DomainSignal EMBL ADU04573.1
   Technical term3D-structure PDB 3ZJX
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3232 Potential EMBL ADU04573.1
Chain33 – 334302 Potential EMBL ADU04573.1
PRO_5000920962
Chain46 – 328283epsilon toxin EMBL ADU04573.1
PRO_5000692029

Sites

Binding site931Phosphate PDB 3ZJX
Binding site2331Phosphate PDB 3ZJX

Experimental info

Non-terminal residue3341 EMBL ADU04573.1

Sequences

Sequence LengthMass (Da)Tools
E7D8R1 [UniParc].

Last modified March 8, 2011. Version 1.
Checksum: 8C80F71E3E30B0B6

FASTA33436,862
        10         20         30         40         50         60 
MKKNLVKSLA IASAVISIYS IVNIVSPTNV IAKEISNTVS NEMSKKASYD NVDTLIEKGR 

        70         80         90        100        110        120 
YNTKYNYLKR MEKYYPNAMA YFDKVTINPQ GNDFYINNPK VELDGEPSMN YLEDVYVGKA 

       130        140        150        160        170        180 
LLTNDTQQEQ KLKSQSFTCK NTDTVTATTT HTVGTSIQAT AKFTVPFNET GVSLTTSYSF 

       190        200        210        220        230        240 
ANTNTNTNSK EITHNVPSQD ILVPANTTVE VIAYLKKVNV KGNVKLVGQV SGSEWGEIPS 

       250        260        270        280        290        300 
YLAFPRDGYK FSLSDTVNKS DLNEDGTINI NGKGNYSAVM GDELIVKVRN LNTNNVQEYV 

       310        320        330 
IPVDKKEKSN DSNIVKYRSL SIKAPGIKAE AAAK 

« Hide

References

[1]"Fusion of Clostridium perfringens type D and B epsilon and beta toxin genes and it's cloning in E. coli."
Pilehchian Langroudi R., Aghaei Pour K., Shamsara M., Ghorashi S.A.
Arch Razi Inst 66:1-10(2011)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: CWD CN 409 EMBL ADU04573.1.
[2]"In silico fusion of epsilon and beta toxin genes of Clostridium perfringens types D and B."
Pilehchian Langroudi R., Aghaei Pour K., Shamsara M., Ghorashi S.A.
Iran. J. Biotechnol. 10:54-60(2012)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: CWD CN 409 EMBL ADU04573.1.
[3]"Clostridium perfringens epsilon toxin H149A mutant as a platform for receptor binding studies."
Bokori-Brown M., Kokkinidou M.C., Savva C.G., Fernandes da Costa S., Naylor C.E., Cole A.R., Moss D.S., Basak A.K., Titball R.W.
Protein Sci. 22:650-659(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (2.40 ANGSTROMS) OF 47-328 IN COMPLEX WITH PHOSPHATE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
HQ179546 Genomic DNA. Translation: ADU04573.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3ZJXX-ray2.40A/B/C/D47-328[»]
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

MINTMINT-8199207.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D2.170.15.10. 2 hits.
InterProIPR023307. Aerolysin-like_beta_cmplx_dom.
IPR009209. Epsilon_toxin.
IPR004991. ETX_MTX2.
[Graphical view]
PfamPF03318. ETX_MTX2. 1 hit.
[Graphical view]
PIRSFPIRSF026587. Epsilon_toxin. 1 hit.
ProtoNetSearch...

Entry information

Entry nameE7D8R1_CLOPF
AccessionPrimary (citable) accession number: E7D8R1
Entry history
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: March 19, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)