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E7B142 (E7B142_YERE1) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length366 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Cell wall formation By similarity. HAMAP-Rule MF_00047 SAAS SAAS011095

Catalytic activity

ATP + 2 D-alanine = ADP + phosphate + D-alanyl-D-alanine. HAMAP-Rule MF_00047 SAAS SAAS011095

Cofactor

Binds 2 magnesium or manganese ions per subunit By similarity. HAMAP-Rule MF_00047 SAAS SAAS011095

Pathway

Cell wall biogenesis; peptidoglycan biosynthesis. HAMAP-Rule MF_00047 SAAS SAAS011095

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00047 SAAS SAAS011095.

Sequence similarities

Belongs to the D-alanine--D-alanine ligase family. HAMAP-Rule MF_00047

Contains 1 ATP-grasp domain. HAMAP-Rule MF_00047

Contains ATP-grasp domain. SAAS SAAS011095

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Domain145 – 348204ATP-grasp By similarity HAMAP-Rule MF_00047
Nucleotide binding175 – 23056ATP By similarity HAMAP-Rule MF_00047

Sites

Metal binding3021Magnesium or manganese 1 By similarity HAMAP-Rule MF_00047
Metal binding3151Magnesium or manganese 1 By similarity HAMAP-Rule MF_00047
Metal binding3151Magnesium or manganese 2 By similarity HAMAP-Rule MF_00047
Metal binding3171Magnesium or manganese 2 By similarity HAMAP-Rule MF_00047

Sequences

Sequence LengthMass (Da)Tools
E7B142 [UniParc].

Last modified March 8, 2011. Version 1.
Checksum: 8636E219BA4E55C8

FASTA36639,679
        10         20         30         40         50         60 
MSKLRVGVIF GGKSAEHEVS LQSAKNIVDA IDKEKFDVTL LGIDKQGKWH VNDASNYLLN 

        70         80         90        100        110        120 
AENPALISLN HSNKNVALIP GQEHQQLIAT DNASALAQLD VIFPIVHGTL GEDGSLQGLL 

       130        140        150        160        170        180 
RMANIPFVGS GVLGSAVSMD KDITKRLLRD AGLNIAPFIT LTRANKDNYR FEQVTAKLGL 

       190        200        210        220        230        240 
PLFIKPANQG SSVGVSKVRN AYEYEQAVAL AFDFDHKVLV ESAIVGREIE CAVMGNDNPQ 

       250        260        270        280        290        300 
ASLCGEVVIS DEFYSYDTKY INETGAKVII PASIGSAVSD NIRAVALAAF RALECRGMAR 

       310        320        330        340        350        360 
VDVFLTPDNR VIINEINTLP GFTNISMYPK LWRATGGGST ELITTLIELA LERHQQDKSL 


KSSILK 

« Hide

References

« Hide 'large scale' references
[1]"Complete genome sequence of Y. enterocolitica subsp. palearctica serogroup O:3."
Batzilla J., Hoeper D., Heesemann J., Rakin A.
Submitted (NOV-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Y11.
[2]"Complete genome sequence of Yersinia enterocolitica subsp. palearctica serogroup O:3."
Batzilla J., Hoper D., Antonenka U., Heesemann J., Rakin A.
J. Bacteriol. 193:2067-2067(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 13030 / CIP 106945 / Y11.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FR729477 Genomic DNA. Translation: CBY26044.1.
RefSeqYP_006005636.1. NC_017564.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCBY26044; CBY26044; Y11_21371.
GeneID12600805.
KEGGyey:Y11_21371.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01921.

Enzyme and pathway databases

BioCycYENT930944:GLMU-2168-MONOMER.
UniPathwayUPA00219.

Family and domain databases

Gene3D3.30.1490.20. 1 hit.
3.30.470.20. 1 hit.
3.40.50.20. 1 hit.
HAMAPMF_00047. Dala_Dala_lig.
InterProIPR011761. ATP-grasp.
IPR013815. ATP_grasp_subdomain_1.
IPR013816. ATP_grasp_subdomain_2.
IPR000291. D-Ala_lig_Van_CS.
IPR005905. D_ala_D_ala.
IPR011095. Dala_Dala_lig_C.
IPR011127. Dala_Dala_lig_N.
IPR016185. PreATP-grasp_dom.
[Graphical view]
PANTHERPTHR23132. PTHR23132. 1 hit.
PfamPF07478. Dala_Dala_lig_C. 1 hit.
PF01820. Dala_Dala_lig_N. 1 hit.
[Graphical view]
SUPFAMSSF52440. SSF52440. 1 hit.
TIGRFAMsTIGR01205. D_ala_D_alaTIGR. 1 hit.
PROSITEPS50975. ATP_GRASP. 1 hit.
PS00843. DALA_DALA_LIGASE_1. 1 hit.
PS00844. DALA_DALA_LIGASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE7B142_YERE1
AccessionPrimary (citable) accession number: E7B142
Entry history
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: June 11, 2014
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)