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E7ABM7 (E7ABM7_HELFC) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:HFELIS_16480 EMBL CBY83732.1
OrganismHelicobacter felis (strain ATCC 49179 / NCTC 12436 / CS1) [Complete proteome] [HAMAP] EMBL CBY83732.1
Taxonomic identifier936155 [NCBI]
Taxonomic lineageBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesHelicobacteraceaeHelicobacter

Protein attributes

Sequence length482 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Sequences

Sequence LengthMass (Da)Tools
E7ABM7 [UniParc].

Last modified March 8, 2011. Version 1.
Checksum: 9377F6EB9FEA1E12

FASTA48255,152
        10         20         30         40         50         60 
MLHTKSHIQR DNEKFVFKAD NSSTPIFGSA ESDVLLPRDK IGKNMMDPRI AYQLVSDEMM 

        70         80         90        100        110        120 
HDGNPRYNLC TFVQTYMEEE ARKIMLDSMA TNAIDKSEYP QTTEIEKRCV NIIANLWNAN 

       130        140        150        160        170        180 
HAEDFMGTST VGSSEACMLG GMAMKFRWRK RAQALGIDIS KQKPNLIVSS GYQVVWEKFC 

       190        200        210        220        230        240 
VYWDVELREV PMSDFNNLTL DPKEAIKLCD DYTIGIVPIM GITYTGGFDD IVTLDRLLSE 

       250        260        270        280        290        300 
YNQKAKISVS IHVDAASGGL YLPFINPDLT WDFRLKNVVS ISTSGHKYGL IYPGIGWVMW 

       310        320        330        340        350        360 
RDKQFLPDEL IFKVAYLGDF EPTFQINFSR SGSQIWAQYY CFVRWGFEGY KAVHAKTRDV 

       370        380        390        400        410        420 
GLFLARGIKS LGLFDMINEG QNIPIICWTM NTKAQKEKQW NLYDLADRLR FNGWQVPAYP 

       430        440        450        460        470        480 
LPANFQNVSV MRIVVRADQS MEQMSLFLKD LKQAIRELDT ANLVSHKHPS ESDDVVPVGY 


TH 

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References

[1]"Comparative whole genome analysis of the carcinogenic bacterial pathogen Helicobacter felis."
Arnold A., Zigova Z., Lawley T., Falkow S., Bentley S., Aslett M., Muller A.
Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 49179 / NCTC 12436 / CS1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FQ670179 Genomic DNA. Translation: CBY83732.1.
RefSeqYP_004074322.1. NC_014810.2.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCBY83732; CBY83732; HFELIS_16480.
GeneID10050817.
KEGGhfe:HFELIS_16480.
PATRIC45241286. VBIHelFel178703_1714.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000070228.
KOK01580.
OMAIADLWNA.

Enzyme and pathway databases

BioCycHFEL936155:GHMC-1614-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameE7ABM7_HELFC
AccessionPrimary (citable) accession number: E7ABM7
Entry history
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: December 11, 2013
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)