E6YHT3 (E6YHT3_BARC7) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Ribonuclease E EMBL CBI76421.1
EC=3.1.4.- EMBL CBI76421.1

Gene names

Name:	rne EMBL CBI76421.1
Ordered Locus Names:	BARCL_0740 EMBL CBI76421.1

Organism

Bartonella clarridgeiae (strain CIP 104772 / 73) [Complete proteome] [HAMAP]

Taxonomic identifier

696125 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bartonellaceae › Bartonella › Bartonella clarridgeiae

Protein attributes

Sequence length	804 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Hydrolase EMBL CBI76421.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	RNA processing Inferred from electronic annotation. Source: InterPro
Molecular_function	RNA binding Inferred from electronic annotation. Source: InterPro ribonuclease activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E6YHT3 [UniParc]. Last modified March 8, 2011. Version 1. Checksum: 611F35D9F7157572	FASTA	804	91,737
	10 20 30 40 50 60 MSNKMLIDAS HPEETRVVVV HDNKIEELDF ESEHKKQLKG NIYLARITRI EPSLQAAFVE 70 80 90 100 110 120 YGGNRHGFLT FAEIHPDYYQ IPVADRLALL EEEKAVINES YGDDPIEETI QNKKSLRKTK 130 140 150 160 170 180 KDKSNSFMAT DIENDIISET IIADDAEEIP DFSNDDIEMV GAEDALEELP TYRRKQGCQY 190 200 210 220 230 240 KIQEVIKRRQ ILLIQVIKEE RGNKGAALTT YLSLAGRYSV LMPNTARGGG ISRKITNIQD 250 260 270 280 290 300 RKRLKEIVKE LAVPKGMGVI LRTAGANRTK AEIKRDYEYL MRLWDTIRAL TLKSTAPCLI 310 320 330 340 350 360 HEESNLIKRS IRDLYSKDIN EILVAGDQGY REAKDFMRML MPSHAKVVQP YRNPIPIFAH 370 380 390 400 410 420 NDIETQLDKM LHPQVSLKSG GYLVINQTEA LVAIDVNSGR STKEHSVEKT ALQTNLEAAE 430 440 450 460 470 480 EIARQLRLRD LAGLIVIDFI DMLETRNIKL VEKKLKDCLK NDRARIQVGH ISHFGLMEMS 490 500 510 520 530 540 RQRIRVSVLE STTQPCPHCA GTGNIRSESS IALHVMRSIE EYLLRNSQYN IIVRTSVATA 550 560 570 580 590 600 LYVLNHKRNI LVNLETRFGL SINIEADDSI GTQHLAISKG SIAKGNSFTS TVIEDNDKNT 610 620 630 640 650 660 VLMTSKTTKD TTSVENNKRR RRKNNKIESN NDGILADAHK DNTQNDDDTR RRGRRRGRRG 670 680 690 700 710 720 GRRNQDNNYQ FRVPYAEPIG DFAKQALEEI KAEYRQYYNI PAAEPVGFNK GTRGYKRHLI 730 740 750 760 770 780 STQQDEIIKT HVAIKSTKHN VKSSEPLKNK RSLVKDKNIT TPKQEEFVEE KLVTKSNRKP 790 800 KIKAINEFAN EVNEEISINK KNQR

References

[1]

"Genome sequencing of Bartonella species and comparative genomics." Engel P., Salzburger W., Marius L., Chao-Chin C., Soichi M., Christa L., Alexandra C., Aurelie L., Claudine M., Stephan S.C., Christoph D. Submitted (NOV-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CIP 104772 / 73.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FN645454 Genomic DNA. Translation: CBI76421.1.
RefSeq	YP_004158999.1. NC_014932.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CBI76421; CBI76421; BARCL_0740.
GeneID	10137609.
KEGG	bcd:BARCL_0740.
PATRIC	45178965. VBIBarCla149360_0701.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000258026.
KO	K08300.
OMA	IKEERGN.
Family and domain databases
Gene3D	2.40.50.140. 2 hits.
InterPro	IPR012340. NA-bd_OB-fold. IPR003029. Rbsml_prot_S1_RNA-bd_dom. IPR019307. RNA-bd_AU-1/RNase_E/G. IPR022967. RNA-binding_domain_S1. IPR004659. RNase_E/G. [Graphical view]
Pfam	PF10150. RNase_E_G. 1 hit. PF00575. S1. 1 hit. [Graphical view]
SMART	SM00316. S1. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR00757. RNaseEG. 1 hit.
ProtoNet	Search...

Entry information

Entry name

E6YHT3_BARC7

Accession

Primary (citable) accession number: E6YHT3

Entry history

Integrated into UniProtKB/TrEMBL:	March 8, 2011
Last sequence update:	March 8, 2011
Last modified:	May 1, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)