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E6XFR1

- E6XFR1_SHEP2

UniProt

E6XFR1 - E6XFR1_SHEP2

Protein
Submitted name:

Pyridoxal-dependent decarboxylase

Gene

Sput200_1479

Organism
Shewanella putrefaciens (strain 200)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 18 (01 Oct 2014)
      Sequence version 1 (08 Mar 2011)
      Previous versions | rss
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    Functioni

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. carboxy-lyase activity Source: InterPro
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. carboxylic acid metabolic process Source: InterPro

    Keywords - Molecular functioni

    LyaseUniRule annotation

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciSPUT399804:GLK4-1510-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Pyridoxal-dependent decarboxylaseImported
    Gene namesi
    Ordered Locus Names:Sput200_1479Imported
    OrganismiShewanella putrefaciens (strain 200)Imported
    Taxonomic identifieri399804 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
    ProteomesiUP000008209: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliE6XFR1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    KOiK01580.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR022517. Asp_decarboxylase_pyridox.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    E6XFR1-1 [UniParc]FASTAAdd to Basket

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    MTQKLPRQAT ASEESLMRIF TVPEDAESTL SIIEQKLSED LAGFLGDSIA    50
    ALEKPLSEIE TDFQAFKIPT QPRFVSDYTD EIMQNLVAHS VHTSAPSFIG 100
    HMTSALPYFV LPLSKMMVGL NQNLVKIETS KAFTPLERQV LGMMHQLIYA 150
    QDTDFYQSWM HSANHSLGAF CSGGTVANIT ALWIARNQLL KADGEFKGVT 200
    REGLLKALRY YGYDDLAILV SERGHYSLGK AVDLLGIGRD NIISIPTDSH 250
    NKVDIAKMRE AALELARKNI KVLAIVGVAG TTETGNVDPL IELAALAKEL 300
    NCHFHVDAAW GGASLLSNKY RHLLAGIELA DSVTIDAHKQ MYVPMGAGMV 350
    LFKNPEFAHA IAHHAEYILR RGSKDLGSQT LEGSRPGMAM LVHACLQIIG 400
    LDGYEILINN SIEKARYFAE QIKAHKDFEL VTEPELCLLT YRYVPAKVQA 450
    AMQVAIEQGD TAKLARFNEL LDGLTQFIQK HQREQGKSFV SRTRISPARY 500
    FRQATVVFRV VLANPLTSHE ILNQVLVEQS EIAALDKEFL PALLAMVAE 549
    Length:549
    Mass (Da):60,764
    Last modified:March 8, 2011 - v1
    Checksum:i8DC902710802647A
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002457 Genomic DNA. Translation: ADV53943.1.
    RefSeqiWP_014610277.1. NC_017566.1.
    YP_006009409.1. NC_017566.1.

    Genome annotation databases

    EnsemblBacteriaiADV53943; ADV53943; Sput200_1479.
    GeneIDi12604700.
    KEGGishp:Sput200_1479.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002457 Genomic DNA. Translation: ADV53943.1 .
    RefSeqi WP_014610277.1. NC_017566.1.
    YP_006009409.1. NC_017566.1.

    3D structure databases

    ProteinModelPortali E6XFR1.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADV53943 ; ADV53943 ; Sput200_1479 .
    GeneIDi 12604700.
    KEGGi shp:Sput200_1479.

    Phylogenomic databases

    KOi K01580.

    Enzyme and pathway databases

    BioCyci SPUT399804:GLK4-1510-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR022517. Asp_decarboxylase_pyridox.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR03799. NOD_PanD_pyr. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 200Imported.

    Entry informationi

    Entry nameiE6XFR1_SHEP2
    AccessioniPrimary (citable) accession number: E6XFR1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 8, 2011
    Last sequence update: March 8, 2011
    Last modified: October 1, 2014
    This is version 18 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3