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Protein
Submitted name:

Pyridoxal-dependent decarboxylase

Gene

Sput200_1479

Organism
Shewanella putrefaciens (strain 200)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

  1. carboxy-lyase activity Source: InterPro
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. carboxylic acid metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotation

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciSPUT399804:GLK4-1510-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Pyridoxal-dependent decarboxylaseImported
Gene namesi
Ordered Locus Names:Sput200_1479Imported
OrganismiShewanella putrefaciens (strain 200)Imported
Taxonomic identifieri399804 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
ProteomesiUP000008209: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

KOiK01580.
OMAiSEEAHYC.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.

Sequencei

Sequence statusi: Complete.

E6XFR1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTQKLPRQAT ASEESLMRIF TVPEDAESTL SIIEQKLSED LAGFLGDSIA
60 70 80 90 100
ALEKPLSEIE TDFQAFKIPT QPRFVSDYTD EIMQNLVAHS VHTSAPSFIG
110 120 130 140 150
HMTSALPYFV LPLSKMMVGL NQNLVKIETS KAFTPLERQV LGMMHQLIYA
160 170 180 190 200
QDTDFYQSWM HSANHSLGAF CSGGTVANIT ALWIARNQLL KADGEFKGVT
210 220 230 240 250
REGLLKALRY YGYDDLAILV SERGHYSLGK AVDLLGIGRD NIISIPTDSH
260 270 280 290 300
NKVDIAKMRE AALELARKNI KVLAIVGVAG TTETGNVDPL IELAALAKEL
310 320 330 340 350
NCHFHVDAAW GGASLLSNKY RHLLAGIELA DSVTIDAHKQ MYVPMGAGMV
360 370 380 390 400
LFKNPEFAHA IAHHAEYILR RGSKDLGSQT LEGSRPGMAM LVHACLQIIG
410 420 430 440 450
LDGYEILINN SIEKARYFAE QIKAHKDFEL VTEPELCLLT YRYVPAKVQA
460 470 480 490 500
AMQVAIEQGD TAKLARFNEL LDGLTQFIQK HQREQGKSFV SRTRISPARY
510 520 530 540
FRQATVVFRV VLANPLTSHE ILNQVLVEQS EIAALDKEFL PALLAMVAE
Length:549
Mass (Da):60,764
Last modified:March 8, 2011 - v1
Checksum:i8DC902710802647A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002457 Genomic DNA. Translation: ADV53943.1.
RefSeqiYP_006009409.1. NC_017566.1.

Genome annotation databases

EnsemblBacteriaiADV53943; ADV53943; Sput200_1479.
GeneIDi12604700.
KEGGishp:Sput200_1479.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002457 Genomic DNA. Translation: ADV53943.1.
RefSeqiYP_006009409.1. NC_017566.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADV53943; ADV53943; Sput200_1479.
GeneIDi12604700.
KEGGishp:Sput200_1479.

Phylogenomic databases

KOiK01580.
OMAiSEEAHYC.

Enzyme and pathway databases

BioCyciSPUT399804:GLK4-1510-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 200Imported.

Entry informationi

Entry nameiE6XFR1_SHEP2
AccessioniPrimary (citable) accession number: E6XFR1
Entry historyi
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: March 4, 2015
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.